| ID | SAVERM_2657
| Type | CDS
|
| From | 3258631
| nt length | 1413
|
| To | 3257219
| aa length | 470
|
| Gene | araE
| pI | 6.16
|
| Definition | putative L-arabinose permease
| M.W (Da) | 50233
|
| Note | PF00083: Sugar (and other) transporter
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO7153 putative sugar transporter | 832 | 0.0e+00
|
| sgr | SGR_1900 putative glucose transporter | 808 | 0.0e+00
|
| sam | SAM23877_5333 Glucose transport protein | 837 | 0.0e+00
|
| scab | SCAB26321 putative L-arabinose permease | 815 | 0.0e+00
|
| sace | SACE_7223 sugar transporter, MFS superfamily | 517 | 0.0e+00
|
| mtub | gi|15610467 PROBABLE SUGAR-TRANSPORT INTEGRAL MEMBRANE PROTEIN SUGI [Mycobacterium tuberculosis H37Rv] | 171 | 1.3e-43
|
| cglu | gi|19551431 COG0477:Permeases of the major facilitator superfamily [Corynebacterium glutamicum] | 199 | 2.3e-52
|
| bsub | BG11907 araE, yvbR; L-arabinose permease | 265 | 4.3e-72
|
| ecoli | gi|16131857 xylose-proton symport [Escherichia coli K12] | 297 | 8.8e-82
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Sugar_tr | 1 | Sugar (and other) transporter | 25-469 | 346.0 | 3e-103
|
| MFS_1 | 1 | Major Facilitator Superfamily | 29-296 | 83.3 | 1.4e-23
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497943.1 | sugar porter family MFS transporter [Streptomyces sp. SID546...
| 2142 | 0.0e+00 |
| WP_067274550.1 | sugar porter family MFS transporter [Streptomyces jeddahensi...
| 2083 | 0.0e+00 |
|
| 2078 | 0.0e+00 |
| PZT68461.1 | MFS transporter [Streptomyces sp. SW4]
| 2064 | 0.0e+00 |
|
| 2060 | 0.0e+00 |
| WP_095936902.1 | sugar porter family MFS transporter [Streptomyces sp. Tue602...
| 2060 | 0.0e+00 |
| MYW15663.1 | sugar porter family MFS transporter [Streptomyces sp. SID2955] >g...
| 2058 | 0.0e+00 |
| WP_028802436.1 | sugar porter family MFS transporter [Streptomyces sp. 142MFC...
| 2056 | 0.0e+00 |
| WP_030216598.1 | sugar porter family MFS transporter [Streptomyces sp. NRRL W...
| 2056 | 0.0e+00 |
| MYR47176.1 | sugar porter family MFS transporter [Streptomyces sp. SID5910]
| 2056 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4376 | Seems to have a cleavable N-term signal seq.
|