| ID | SAVERM_2670
| Type | CDS
|
| From | 3272485
| nt length | 588
|
| To | 3271898
| aa length | 195
|
| Gene |
| pI | 6.03
|
| Definition | putative RNA methylase
| M.W (Da) | 20954
|
| Note | PF03602: Conserved hypothetical protein 95
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | RNA modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5567 putative methylase | 347 | 2.0e-124
|
| sgr | SGR_1913 putative RNA methylase | 320 | 7.0e-114
|
| sam | SAM23877_5321 DNA methylase | 350 | 1.0e-125
|
| scab | SCAB26431 putative RNA methylase | 328 | 6.0e-117
|
| sace | SACE_6107 possible methyltransferase (methylase) | 168 | 1.0e-53
|
| nfar | nfa41900 hypothetical protein | 171 | 3.9e-44
|
| mtub | gi|15610103 POSSIBLE METHYLTRANSFERASE (METHYLASE) [Mycobacterium tuberculosis H37Rv] | 154 | 5.0e-39
|
| cglu | gi|19552546 COG0742:N6-adenine-specific methylase [Corynebacterium glutamicum] | 130 | 5.5e-32
|
| bsub | BG13360 ylbH; similar to hypothetical proteins | 96 | 8.3e-22
|
| ecoli | gi|16131337 putative methyltransferase [Escherichia coli K12] | 96 | 9.3e-22
|
| paer | PA0370 [gene=PA0370] [prot=conserved hypothetical protein] [comment=PA0370] | 95 | 2.8e-21
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Cons_hypoth95 | 1 | Conserved hypothetical protein 95 | 2-184 | 179.5 | 4.4e-53
|
| MTS | 1 | Methyltransferase small domain | 47-131 | 28.6 | 8.2e-07
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_171143214.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 921 | 2.1e-125 |
| WP_071367766.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 920 | 2.8e-125 |
| WP_055493522.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 918 | 6.0e-125 |
| WP_059131740.1 | MULTISPECIES: 16S rRNA (guanine(966)-N(2))-methyltransferase...
| 915 | 1.6e-124 |
| WP_103845044.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 914 | 3.1e-124 |
| WP_219184761.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 913 | 3.6e-124 |
| WP_153177768.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 913 | 3.8e-124 |
| WP_200422595.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 913 | 4.1e-124 |
| WP_007444890.1 | MULTISPECIES: 16S rRNA (guanine(966)-N(2))-methyltransferase...
| 911 | 6.5e-124 |
| WP_100044541.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Strepto...
| 910 | 1.3e-123 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2943 | Seems to have no N-terminal signal seq.
|