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IDSAVERM_2675 TypeCDS
From3283164 nt length186
To3283349 aa length61
GenerpmB1 pI12.08
Definitionputative ribosomal protein L28 M.W (Da)6618
NotePF00830: Ribosomal L28 family AseI frg.J
SignalP v.4.0Non-secretory protein | plot Categoryribosomal protein

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5564 putative 50S ribosomal protein L281205.0e-39
sgrSGR_1916 putative 50S ribosomal protein L281113.0e-35
scabSCAB26481 putative ribosomal protein L281206.0e-39
saceSACE_6123 50S ribosomal protein L28882.0e-26
nfarnfa41960 rpmB2 ribosomal protein L28955.2e-22
bsubBG10777 rpmB, yloT; 50S ribosomal protein L28563.0e-10

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L281Ribosomal L28 family4-5885.51.9e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_004924906.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3128.4e-37
WP_102913572.1 50S ribosomal protein L28 [Streptomyces cahuitamycinicus] >g... 3101.7e-36
WP_037625034.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3092.2e-36
WP_073491182.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3083.4e-36
WP_151775442.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3084.0e-36
WP_033282681.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3084.0e-36
WP_079163674.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3075.2e-36
WP_105970634.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >lcl 3067.1e-36
WP_030195073.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >lcl 3067.6e-36
WP_003993230.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 3068.1e-36

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4395 Seems to have no N-terminal signal seq.