| ID | SAVERM_2686
| Type | CDS
|
| From | 3292997
| nt length | 1434
|
| To | 3291564
| aa length | 477
|
| Gene | leuC
| pI | 4.9
|
| Definition | putative 3-isopropylmalate dehydratase subunit large
| M.W (Da) | 50345
|
| Note | PF00330: Aconitase family (aconitate hydratase)
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5553 3-isopropylmalate dehydratase large subunit | 905 | 0.0e+00
|
| sgr | SGR_1929 putative 3-isopropylmalate dehydratase large subunit | 901 | 0.0e+00
|
| sam | SAM23877_5305 3-isopropylmalate isomerase subunit, dehydratase component | 901 | 0.0e+00
|
| scab | SCAB26611 putative 3-isopropylmalate dehydratase subunit large | 889 | 0.0e+00
|
| sace | SACE_6144 3-isopropylmalate dehydratase large subunit | 767 | 0.0e+00
|
| nfar | nfa42120 leuC 3-isopropylmalate dehydratase large subunit | 738 | 0.0e+00
|
| mtub | gi|15610125 isopropylmalate isomerase large subunit [Mycobacterium tuberculosis H37Rv] | 721 | 0.0e+00
|
| cglu | gi|19552534 COG0065:3-isopropylmalate dehydratase large subunit [Corynebacterium glutamicum] | 664 | 0.0e+00
|
| bsub | BG11949 leuC; 3-isopropylmalate dehydratase large subunit [EC:4.2.1.33] | 570 | 4.8e-164
|
| ecoli | gi|16128066 isopropylmalate isomerase large subunit [Escherichia coli K12] | 585 | 1.6e-168
|
| paer | PA3121 [gene=leuC] [prot=3-isopropylmalate dehydratase large subunit] [comment=PA3121] | 543 | 1.7e-155
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Aconitase | 1 | Aconitase family (aconitate hydratase) | 7-457 | 513.9 | 3.9e-154
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_075031173.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces mi...
| 2448 | 0.0e+00 |
| WP_181649923.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces sp...
| 2447 | 0.0e+00 |
| WP_095852420.1 | MULTISPECIES: 3-isopropylmalate dehydratase large subunit [u...
| 2442 | 0.0e+00 |
| WP_067371007.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces ol...
| 2439 | 0.0e+00 |
| WP_190172461.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces mi...
| 2439 | 0.0e+00 |
| WP_028802405.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces sp...
| 2438 | 0.0e+00 |
| WP_054235402.1 | MULTISPECIES: 3-isopropylmalate dehydratase large subunit [u...
| 2437 | 0.0e+00 |
| WP_217568418.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces sp...
| 2434 | 0.0e+00 |
| WP_143603034.1 | MULTISPECIES: 3-isopropylmalate dehydratase large subunit [u...
| 2430 | 0.0e+00 |
| WP_095936869.1 | 3-isopropylmalate dehydratase large subunit [Streptomyces sp...
| 2429 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2026 | Seems to have no N-terminal signal seq.
|