| ID | SAVERM_2737
| Type | CDS
|
| From | 3362169
| nt length | 1164
|
| To | 3363332
| aa length | 387
|
| Gene |
| pI | 8.38
|
| Definition | putative oxidoreductase
| M.W (Da) | 40400
|
| Note | PF07995: Glucose / Sorbosone dehydrogenase
| AseI frg. | J
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5508 putative oxidoreductase | 593 | 0.0e+00
|
| sgr | SGR_2007 putative oxidoreductase | 474 | 3.0e-169
|
| sam | SAM23877_5257 Oxidoreductase | 573 | 0.0e+00
|
| scab | SCAB27131 putative oxidoreductase | 527 | 0.0e+00
|
| sace | SACE_0825 glucose dehydrogenase [pyrroloquinoline-quinone] | 142 | 1.0e-39
|
| nfar | nfa15640 oxidoreductase | 345 | 5.0e-96
|
| mtub | gi|15610143 PROBABLE CONSERVED LIPOPROTEIN LPPZ [Mycobacterium tuberculosis H37Rv] | 92 | 5.8e-20
|
| ecoli | gi|16128805 putative dehydrogenase [Escherichia coli K12] | 117 | 9.9e-28
|
| paer | PA1112 [gene=PA1112] [prot=conserved hypothetical protein] [comment=PA1112] | 138 | 9.7e-34
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GSDH | 1 | Glucose / Sorbosone dehydrogenase | 71-371 | 254.3 | 1.7e-75
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497961.1 | PQQ-dependent sugar dehydrogenase [Streptomyces sp. SID5469]
| 1804 | 0.0e+00 |
| GGN75815.1 | oxidoreductase [Streptomyces albiflavescens]
| 1466 | 0.0e+00 |
| WP_229703427.1 | PQQ-dependent sugar dehydrogenase [Streptomyces albiflavesce...
| 1464 | 0.0e+00 |
| WP_078972932.1 | PQQ-dependent sugar dehydrogenase [Streptomyces sp. MMG1533]...
| 1462 | 0.0e+00 |
| WP_234330038.1 | PQQ-dependent sugar dehydrogenase [Streptomyces viridochromo...
| 1456 | 0.0e+00 |
| KMS75494.1 | glucose sorbosone dehydrogenase [Streptomyces viridochromogenes] ...
| 1455 | 0.0e+00 |
| WP_031106621.1 | PQQ-dependent sugar dehydrogenase [Streptomyces sp. NRRL S-1...
| 1455 | 0.0e+00 |
| WP_078507533.1 | MULTISPECIES: PQQ-dependent sugar dehydrogenase [Streptomyce...
| 1453 | 0.0e+00 |
| WP_164429841.1 | PQQ-dependent sugar dehydrogenase [Streptomyces sp. SID13726...
| 1453 | 0.0e+00 |
| WP_079186838.1 | PQQ-dependent sugar dehydrogenase [Streptomyces sp. TSRI0107...
| 1452 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | May be a lipoprotein
|