| ID | SAVERM_2763
| Type | CDS
|
| From | 3390851
| nt length | 657
|
| To | 3390195
| aa length | 218
|
| Gene |
| pI | 7.06
|
| Definition | hypothetical protein
| M.W (Da) | 23396
|
| Note | PF03458: UPF0126 domain
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5481 putative integral membrane protein | 383 | 4.0e-138
|
| sgr | SGR_2036 putative membrane protein | 377 | 9.0e-136
|
| sam | SAM23877_5219 conserved membrane protein of unknown function | 384 | 3.0e-138
|
| scab | SCAB27371 hypothetical protein | 338 | 4.0e-120
|
| sace | SACE_1885 putative integral membrane protein | 244 | 4.0e-83
|
| cglu | gi|19551902 COG2860:Predicted membrane protein [Corynebacterium glutamicum] | 104 | 3.8e-24
|
| bsub | BG14102 yvgT; similar to hypothetical proteins | 107 | 5.5e-25
|
| ecoli | gi|16128150 hypothetical protein b0157 [Escherichia coli K12] | 110 | 9.7e-26
|
| paer | PA1037 [gene=PA1037] [prot=conserved hypothetical protein] [comment=PA1037] | 123 | 1.1e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPF0126 | 2 | UPF0126 domain | 13-87, 99-173 | 136.5 | 2.1e-40
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_235456532.1 | trimeric intracellular cation channel family protein [Strept...
| 874 | 1.6e-117 |
| WP_202497965.1 | trimeric intracellular cation channel family protein [Strept...
| 871 | 7.5e-117 |
| WP_184988420.1 | trimeric intracellular cation channel family protein [Strept...
| 860 | 3.5e-115 |
| WP_048580552.1 | trimeric intracellular cation channel family protein [Strept...
| 858 | 5.6e-115 |
| WP_142142617.1 | trimeric intracellular cation channel family protein [Strept...
| 857 | 7.5e-115 |
| WP_010041776.1 | trimeric intracellular cation channel family protein [Strept...
| 856 | 1.3e-114 |
| WP_019058540.1 | trimeric intracellular cation channel family protein [Strept...
| 855 | 1.5e-114 |
| WP_210587991.1 | trimeric intracellular cation channel family protein [Strept...
| 855 | 1.7e-114 |
| WP_030851340.1 | trimeric intracellular cation channel family protein [Strept...
| 855 | 1.7e-114 |
| WP_094056288.1 | trimeric intracellular cation channel family protein [Strept...
| 855 | 1.8e-114 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3675 | Seems to have no N-terminal signal seq.
|