| ID | SAVERM_2800
| Type | CDS
|
| From | 3437513
| nt length | 2637
|
| To | 3434877
| aa length | 878
|
| Gene | glgP
| pI | 5.41
|
| Definition | putative glycogen phosphorylase
| M.W (Da) | 97014
|
| Note | PF00343: Carbohydrate phosphorylase
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | specific pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5444 putative glycogen phosphorylase | 1485 | 0.0e+00
|
| sgr | SGR_2097 putative glycogen phosphorylase | 1352 | 0.0e+00
|
| sam | SAM23877_5186 Glycogen phosphorylase | 1517 | 0.0e+00
|
| scab | SCAB27951 putative glycogen phosphorylase | 1542 | 0.0e+00
|
| sace | SACE_6216 hypothetical protein | 921 | 0.0e+00
|
| nfar | nfa10800 glgP glycogen phosphorylase | 991 | 0.0e+00
|
| mtub | gi|15608468 PROBABLE GLYCOGEN PHOSPHORYLASE GLGP [Mycobacterium tuberculosis H37Rv] | 971 | 0.0e+00
|
| cglu | gi|19553284 COG0058:Glucan phosphorylase [Corynebacterium glutamicum] | 776 | 0.0e+00
|
| bsub | BG10911 glgP; glycogen phosphorylase [EC:2.4.1.1] | 67 | 4.5e-12
|
| ecoli | gi|49176351 maltodextrin phosphorylase [Escherichia coli K12] | 88 | 1.6e-18
|
| paer | PA2144 [gene=glgP] [prot=glycogen phosphorylase] [comment=PA2144] | 103 | 8.8e-23
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3417 | 1 | Protein of unknown function (DUF3417) | 13-126 | 120.2 | 4.7e-35
|
| Phosphorylase | 2 | Carbohydrate phosphorylase | 131-176, 278-635 | 83.3 | 1.1e-23
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| QIY98354.1 | glycosyltransferase family 1 protein [Streptomyces sp. S1D4-11]
| 4049 | 0.0e+00 |
| WP_151483799.1 | glycosyltransferase family 1 protein [Streptomyces albicerus...
| 4033 | 0.0e+00 |
| WP_200395779.1 | glycosyltransferase family 1 protein [Streptomyces sp. ZYC-3...
| 4032 | 0.0e+00 |
| WP_168495695.1 | MULTISPECIES: glycosyltransferase family 1 protein [Streptom...
| 4032 | 0.0e+00 |
| WP_143640516.1 | glycosyltransferase family 1 protein [Streptomyces sp. IB201...
| 4031 | 0.0e+00 |
| WP_189843708.1 | glycosyltransferase family 1 protein [Streptomyces umbrinus]...
| 4015 | 0.0e+00 |
| WP_055493653.1 | glycosyltransferase family 1 protein [Streptomyces sp. TP-A0...
| 4009 | 0.0e+00 |
| NGO47365.1 | glycosyltransferase family 1 protein [Streptomyces ureilyticus]
| 4001 | 0.0e+00 |
| MPY62438.1 | glycosyltransferase family 1 protein [Streptomyces spongiae]
| 3997 | 0.0e+00 |
| WP_168534073.1 | glycosyltransferase family 1 protein [Streptomyces sp. RPA4-...
| 3995 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1810 | Seems to have no N-terminal signal seq.
|