| ID | SAVERM_2833
| Type | CDS
|
| From | 3479773
| nt length | 339
|
| To | 3479435
| aa length | 112
|
| Gene |
| pI | 9.97
|
| Definition | putative secreted protein
| M.W (Da) | 12374
|
| Note |
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5414 hypothetical protein | 171 | 1.0e-57
|
| sgr | SGR_2121 conserved hypothetical protein | 122 | 3.0e-38
|
| sam | SAM23877_5160 conserved exported protein of unknown function | 172 | 6.0e-58
|
| scab | SCAB28311 hypothetical protein | 143 | 2.0e-46
|
| sace | SACE_1311 hypothetical protein | 91 | 1.0e-25
|
| nfar | nfa10970 hypothetical protein | 96 | 4.2e-22
|
| mtub | gi|57116851 hypothetical protein Rv1342c [Mycobacterium tuberculosis H37Rv] | 78 | 9.4e-17
|
| cglu | gi|19553699 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 77 | 1.5e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3817 | 1 | Domain of unknown function (DUF3817) | 6-96 | 96.5 | 1.2e-27
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_041665507.1 | MULTISPECIES: DUF3817 domain-containing protein [Streptomyce...
| 526 | 7.8e-68 |
| WP_016438192.1 | DUF3817 domain-containing protein [Streptomyces sp. HGB0020]...
| 525 | 1.2e-67 |
| WP_097252369.1 | DUF3817 domain-containing protein [Streptomyces sp. Ag109_G2...
| 524 | 1.4e-67 |
| WP_145883606.1 | DUF3817 domain-containing protein [Streptomyces sp. BK340] >...
| 524 | 1.7e-67 |
| WP_108014939.1 | MULTISPECIES: DUF3817 domain-containing protein [unclassifie...
| 523 | 1.9e-67 |
| WP_094216047.1 | DUF3817 domain-containing protein [Streptomyces diastatochro...
| 523 | 2.2e-67 |
| WP_152893904.1 | DUF3817 domain-containing protein [Streptomyces adustus] >gb...
| 522 | 2.9e-67 |
| WP_040896334.1 | MULTISPECIES: DUF3817 domain-containing protein [Streptomyce...
| 522 | 3.5e-67 |
| WP_103812633.1 | DUF3817 domain-containing protein [Streptomyces sp. Ru62] >g...
| 520 | 6.9e-67 |
| WP_210587916.1 | DUF3817 domain-containing protein [Streptomyces sp. GESEQ-35...
| 520 | 7.3e-67 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1128 | Seems to have a cleavable N-term signal seq.
|