| ID | SAVERM_2848
| Type | CDS
|
| From | 3492902
| nt length | 294
|
| To | 3492609
| aa length | 97
|
| Gene |
| pI | 4.84
|
| Definition | hypothetical protein
| M.W (Da) | 10416
|
| Note | PF01910: Domain of unknown function DUF77
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| sgr | SGR_2128 conserved hypothetical protein | 151 | 3.0e-50
|
| sam | SAM23877_5158 hypothetical protein | 150 | 1.0e-49
|
| scab | SCAB28371 hypothetical protein | 176 | 9.0e-60
|
| sace | SACE_6220 protein of unknown function DUF77 | 107 | 1.0e-32
|
| nfar | nfa31680 hypothetical protein | 140 | 2.1e-35
|
| mtub | gi|15609035 hypothetical protein Rv1898 [Mycobacterium tuberculosis H37Rv] | 127 | 1.8e-31
|
| cglu | gi|19552440 COG0011:Uncharacterized ACR [Corynebacterium glutamicum] | 105 | 3.0e-25
|
*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Thiamine_BP | 1 | Thiamine-binding protein | 3-92 | 101.2 | 2e-29
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
|
| 355 | 2.9e-42 |
| WP_069926878.1 | MTH1187 family thiamine-binding protein [Streptomyces agglom...
| 355 | 3.2e-42 |
| WP_138896595.1 | MTH1187 family thiamine-binding protein [Streptomyces chryse...
| 355 | 3.7e-42 |
| WP_152789764.1 | MTH1187 family thiamine-binding protein [Streptomyces phylla...
| 354 | 4.3e-42 |
| WP_067003088.1 | MTH1187 family thiamine-binding protein [Streptomyces cellos...
| 353 | 5.4e-42 |
| WP_225827367.1 | MTH1187 family thiamine-binding protein [Streptomyces sp. TM...
| 353 | 5.5e-42 |
| WP_013000617.1 | MULTISPECIES: MTH1187 family thiamine-binding protein [Strep...
| 353 | 7.3e-42 |
| WP_086844657.1 | MULTISPECIES: MTH1187 family thiamine-binding protein [Strep...
| 352 | 7.9e-42 |
| WP_234514045.1 | MTH1187 family thiamine-binding protein [Streptomyces glomer...
| 352 | 8.7e-42 |
|
| 352 | 9.5e-42 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have an uncleavable N-term signal seq
|