| ID | SAVERM_2884
| Type | CDS
|
| From | 3530860
| nt length | 822
|
| To | 3530039
| aa length | 273
|
| Gene | atpH
| pI | 5.09
|
| Definition | putative F-type proton-transporting ATPase delta chain
| M.W (Da) | 29171
|
| Note | PF00213: ATP synthase delta (OSCP) subunit
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5370 atpH ATP synthase delta chain | 421 | 3.0e-151
|
| sgr | SGR_2166 putative ATP synthase delta chain | 404 | 2.0e-144
|
| sam | SAM23877_5116 ATP synthase subunit delta | 425 | 9.0e-153
|
| scab | SCAB28791 putative F-type proton-transporting ATPase delta chain | 419 | 1.0e-150
|
| sace | SACE_6283 ATP synthase delta chain | 197 | 6.0e-63
|
| nfar | nfa10620 atpH ATP synthase delta subunit | 188 | 5.0e-49
|
| mtub | gi|15608447 PROBABLE ATP SYNTHASE DELTA CHAIN ATPH [Mycobacterium tuberculosis H37Rv] | 160 | 1.1e-40
|
| cglu | gi|19552432 COG0712:F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein) [Corynebacterium glutamicum] | 152 | 1.6e-38
|
| bsub | BG10818 atpH; ATP synthase delta chain [EC:3.6.1.34] | 56 | 2.0e-09
|
| ecoli | gi|16131603 ATP synthase subunit D [Escherichia coli K12] | 51 | 7.3e-08
|
| paer | PA5557 [gene=atpH] [prot=ATP synthase delta chain] [comment=PA5557] | 58 | 4.8e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| OSCP | 1 | ATP synthase delta (OSCP) subunit | 111-270 | 132.2 | 1.9e-38
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095852575.1 | MULTISPECIES: F0F1 ATP synthase subunit delta [unclassified ...
| 958 | 2.1e-128 |
| QIY98289.1 | F0F1 ATP synthase subunit delta [Streptomyces sp. S1D4-11]
| 957 | 2.9e-128 |
| WP_168495590.1 | MULTISPECIES: F0F1 ATP synthase subunit delta [Streptomyces]...
| 956 | 3.3e-128 |
| WP_217567846.1 | F0F1 ATP synthase subunit delta [Streptomyces sp. GbtcB7]
| 954 | 7.2e-128 |
| WP_190174301.1 | F0F1 ATP synthase subunit delta [Streptomyces mirabilis] >db...
| 953 | 9.7e-128 |
| WP_037624940.1 | F0F1 ATP synthase subunit delta [Streptomyces aureus]
| 952 | 1.4e-127 |
| WP_134029920.1 | F0F1 ATP synthase subunit delta [Streptomyces bluensis] >dbj...
| 951 | 2.2e-127 |
| WP_119099311.1 | F0F1 ATP synthase subunit delta [Streptomyces sporangiiforma...
| 951 | 2.4e-127 |
| WP_138050567.1 | F0F1 ATP synthase subunit delta [Streptomyces montanus] >lcl...
| 950 | 3.0e-127 |
| WP_181655524.1 | F0F1 ATP synthase subunit delta [Streptomyces himalayensis] ...
| 947 | 7.4e-127 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2269 | Seems to have no N-terminal signal seq.
|