| ID | SAVERM_2885
| Type | CDS
|
| From | 3531399
| nt length | 543
|
| To | 3530857
| aa length | 180
|
| Gene | atpF
| pI | 4.62
|
| Definition | putative F-type proton-transporting ATPase b chain
| M.W (Da) | 19781
|
| Note | PF00430: ATP synthase B/B' CF(0)
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5369 atpf ATP synthase B chain | 290 | 2.0e-102
|
| sgr | SGR_2167 putative ATP synthase B chain | 275 | 1.0e-96
|
| sam | SAM23877_5115 ATP synthase subunit b | 283 | 2.0e-99
|
| scab | SCAB28801 putative F-type proton-transporting ATPase b chain | 282 | 3.0e-99
|
| sace | SACE_6284 ATP synthase B chain | 118 | 1.0e-34
|
| nfar | nfa10610 atpF ATP synthase B subunit | 157 | 5.4e-40
|
| mtub | gi|15608446 ATP synthase subunit B [Mycobacterium tuberculosis H37Rv] | 72 | 2.2e-14
|
| cglu | gi|19552431 COG0711:F0F1-type ATP synthase b subunit [Corynebacterium glutamicum] | 124 | 2.1e-30
|
| bsub | BG10817 atpF; ATP synthase b chain [EC:3.6.1.34] | 68 | 1.7e-13
|
| ecoli | gi|16131604 ATP synthase subunit B [Escherichia coli K12] | 70 | 6.3e-14
|
| paer | PA5558 [gene=atpF] [prot=ATP synthase B chain] [comment=PA5558] | 64 | 6.5e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ATP-synt_B | 1 | ATP synthase B/B' CF(0) | 23-151 | 95.9 | 1.9e-27
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4736 | Seems to have an uncleavable N-term signal seq
|