| ID | SAVERM_2910
| Type | CDS
|
| From | 3642189
| nt length | 648
|
| To | 3641542
| aa length | 215
|
| Gene |
| pI | 4.35
|
| Definition | hypothetical protein
| M.W (Da) | 22676
|
| Note | PF01300: yrdC domain
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5362 conserved hypothetical protein | 405 | 9.0e-147
|
| sgr | SGR_2174 conserved hypothetical protein | 402 | 2.0e-145
|
| sam | SAM23877_5107 putative threonylcarbamoyl-AMP synthase | 403 | 4.0e-146
|
| scab | SCAB28871 hypothetical protein | 407 | 1.0e-147
|
| sace | SACE_6289 SUA5/YciO/YrdC/YwlC | 224 | 2.0e-75
|
| nfar | nfa10560 hypothetical protein | 234 | 5.7e-63
|
| mtub | gi|15608441 hypothetical protein Rv1301 [Mycobacterium tuberculosis H37Rv] | 238 | 1.8e-64
|
| cglu | gi|19552426 COG0009:Putative translation factor (SUA5) [Corynebacterium glutamicum] | 238 | 1.3e-64
|
| bsub | BG10939 ywlC, ipc-29d; similar to unknown proteins | 131 | 3.5e-32
|
| ecoli | gi|49176093 hypothetical protein b1267 [Escherichia coli K12] | 57 | 5.6e-10
|
| paer | PA0022 [gene=PA0022] [prot=conserved hypothetical protein] [comment=PA0022] | 77 | 7.0e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Sua5_yciO_yrdC | 1 | Telomere recombination | 23-197 | 156.7 | 4e-46
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189189183.1 | threonylcarbamoyl-AMP synthase [Streptomyces albiflavescens]...
| 1083 | 2.3e-149 |
| WP_099499933.1 | MULTISPECIES: threonylcarbamoyl-AMP synthase [Streptomyces] ...
| 1081 | 4.5e-149 |
| WP_158924792.1 | threonylcarbamoyl-AMP synthase [Streptomyces broussonetiae] ...
| 1070 | 2.1e-147 |
| WP_165340667.1 | threonylcarbamoyl-AMP synthase [Streptomyces ureilyticus] >g...
| 1069 | 3.0e-147 |
| WP_131559019.1 | MULTISPECIES: threonylcarbamoyl-AMP synthase [Streptomyces] ...
| 1069 | 3.2e-147 |
| WP_152781141.1 | threonylcarbamoyl-AMP synthase [Streptomyces phyllanthi] >gb...
| 1069 | 3.2e-147 |
| WP_107021303.1 | MULTISPECIES: threonylcarbamoyl-AMP synthase [Streptomyces] ...
| 1068 | 3.6e-147 |
| WP_119099305.1 | threonylcarbamoyl-AMP synthase [Streptomyces sporangiiforman...
| 1065 | 1.0e-146 |
| WP_149511528.1 | threonylcarbamoyl-AMP synthase [Streptomyces apricus] >lcl
| 1065 | 1.3e-146 |
| WP_134029902.1 | threonylcarbamoyl-AMP synthase [Streptomyces bluensis] >dbj
| 1065 | 1.3e-146 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2107 | Seems to have no N-terminal signal seq.
|