| ID | SAVERM_2911
| Type | CDS
|
| From | 3643123
| nt length | 882
|
| To | 3642242
| aa length | 293
|
| Gene | hemK
| pI | 4.83
|
| Definition | putative modification methyltransferase
| M.W (Da) | 32512
|
| Note | PF01170: Putative RNA methylase family UPF0020
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5361 putative methylase | 529 | 0.0e+00
|
| sgr | SGR_2175 putative methyltransferase | 515 | 0.0e+00
|
| sam | SAM23877_5106 Release factor glutamine methyltransferase | 520 | 0.0e+00
|
| scab | SCAB28881 putative modification methyltransferase | 526 | 0.0e+00
|
| sace | SACE_6291 putative methyltransferase | 235 | 3.0e-77
|
| nfar | nfa10550 methyltransferase | 251 | 6.9e-68
|
| mtub | gi|15608440 PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium tuberculosis H37Rv] | 206 | 2.0e-54
|
| cglu | gi|19552425 COG2890:Predicted rRNA or tRNA methylase [Corynebacterium glutamicum] | 179 | 1.4e-46
|
| bsub | BG11316 ywkE; hemK protein homolog; probable protoporphyrinogen oxidase | 106 | 1.9e-24
|
| ecoli | gi|16129175 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli K12] | 97 | 9.7e-22
|
| paer | PA4664 [gene=hemK] [prot=probable methyl transferase] [comment=PA4664] | 113 | 1.8e-26
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Methyltransf_25 | 1 | Methyltransferase domain | 127-211 | 51.3 | 1.4e-13
|
| MTS | 1 | Methyltransferase small domain | 126-199 | 49.0 | 4.4e-13
|
| Methyltransf_31 | 1 | Methyltransferase domain | 127-255 | 42.5 | 5.3e-11
|
| Methyltransf_11 | 1 | Methyltransferase domain | 129-196 | 38.0 | 1.8e-09
|
| Cons_hypoth95 | 1 | Conserved hypothetical protein 95 | 103-199 | 28.2 | 1.2e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| SBT90545.1 | release factor glutamine methyltransferase [Streptomyces sp. DI1...
| 1454 | 0.0e+00 |
| WP_205036319.1 | peptide chain release factor N(5)-glutamine methyltransferas...
| 1448 | 0.0e+00 |
| SNX64049.1 | release factor glutamine methyltransferase [Streptomyces sp. TLI...
| 1447 | 0.0e+00 |
| ATL30497.1 | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypep...
| 1447 | 0.0e+00 |
| GGT89971.1 | release factor glutamine methyltransferase [Streptomyces bellus]...
| 1440 | 0.0e+00 |
| GGK51631.1 | release factor glutamine methyltransferase [Streptomyces flaveus...
| 1440 | 0.0e+00 |
| GHC46914.1 | release factor glutamine methyltransferase [Streptomyces flavofu...
| 1440 | 0.0e+00 |
| GGS19775.1 | release factor glutamine methyltransferase [Streptomyces humidus...
| 1440 | 0.0e+00 |
| GGV84262.1 | release factor glutamine methyltransferase [Streptomyces massasp...
| 1439 | 0.0e+00 |
| GGW47879.1 | release factor glutamine methyltransferase [Streptomyces galilae...
| 1435 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2147 | Seems to have no N-terminal signal seq.
|