| ID | SAVERM_2916
| Type | CDS
|
| From | 3649738
| nt length | 918
|
| To | 3648821
| aa length | 305
|
| Gene | thrB
| pI | 5.4
|
| Definition | putative homoserine kinase
| M.W (Da) | 31358
|
| Note | PF00288: GHMP kinases N terminal domain
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5356 thrB homoserine kinase | 509 | 0.0e+00
|
| sgr | SGR_2180 putative homoserine kinase | 538 | 0.0e+00
|
| sam | SAM23877_5100 putative homoserine kinase | 508 | 0.0e+00
|
| scab | SCAB28941 putative homoserine kinase | 558 | 0.0e+00
|
| sace | SACE_6296 homoserine kinase | 225 | 4.0e-73
|
| nfar | nfa10510 thrB homoserine kinase | 265 | 4.9e-72
|
| mtub | gi|15608436 homoserine kinase [Mycobacterium tuberculosis H37Rv] | 218 | 3.1e-58
|
| cglu | gi|19552408 COG0083:Homoserine kinase [Corynebacterium glutamicum] | 219 | 1.7e-58
|
| bsub | BG10462 thrB, thrA; homoserine kinase [EC:2.7.1.39] | 125 | 3.1e-30
|
| ecoli | gi|16127997 homoserine kinase [Escherichia coli K12] | 107 | 1.3e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GHMP_kinases_N | 1 | GHMP kinases N terminal domain | 88-151 | 45.1 | 8e-12
|
| GHMP_kinases_C | 1 | GHMP kinases C terminal | 222-280 | 34.6 | 1.7e-08
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1404 | Seems to have no N-terminal signal seq.
|