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IDSAVERM_2979 TypeCDS
From3736094 nt length210
To3735885 aa length69
Gene pI10.79
Definitionhypothetical protein M.W (Da)7800
NotePF08281: Sigma-70, region 4 AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categoryno similarity

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_2232 conserved hypothetical protein1271.0e-41
samSAM23877_5051 hypothetical protein1251.0e-40
scabSCAB29841 hypothetical protein1301.0e-42
saceSACE_0031 hypothetical protein1164.0e-37
nfarnfa51500 hypothetical protein958.6e-22

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_231Homeodomain-like domain41-6326.63.4e-06

HTH_111HTH domain38-6425.96.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_010984411.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3441.8e-41
WP_121405930.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3432.8e-41
WP_107021356.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3423.8e-41
WP_033282107.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3424.4e-41
WP_217454569.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3415.2e-41
GHK00984.1 hypothetical protein SY2F82_27810 [Streptomyces sp. Y2F8-2] 3435.4e-41
WP_040248424.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3416.1e-41
WP_081219377.1 MULTISPECIES: HTH domain-containing protein [Streptomyces] >... 3416.9e-41
WP_149511566.1 helix-turn-helix domain-containing protein [Streptomyces apr... 3409.5e-41
WP_018571396.1 MULTISPECIES: HTH domain-containing protein [Streptomyces] >... 3391.1e-40

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2094 Seems to have no N-terminal signal seq.