| ID | SAVERM_2982
| Type | CDS
|
| From | 3739316
| nt length | 960
|
| To | 3740275
| aa length | 319
|
| Gene | aotJ
| pI | 9.01
|
| Definition | putative arginine/ornithine ABC transporter substrate-binding protein
| M.W (Da) | 33335
|
| Note | gltI, PF00497: Bacterial extracellular solute-binding proteins, family 3
| AseI frg. | N
|
| SignalP v.4.0 | Signal peptide | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5260 atrA secreted protein | 507 | 0.0e+00
|
| sgr | SGR_2237 putative arginine/ornithine binding protein | 337 | 1.0e-116
|
| sam | SAM23877_5048 Secreted protein | 511 | 0.0e+00
|
| scab | SCAB29881 putative arginine/ornithine ABC transporter substrate-binding protein | 449 | 7.0e-161
|
| nfar | nfa18890 transporter substrate-binding protein | 181 | 5.8e-47
|
| cglu | gi|19552550 COG0834:ABC-type amino acid transport system, periplasmic component [Corynebacterium glutamicum] | 133 | 1.3e-32
|
| ecoli | gi|16128779 glutamine ABC transporter periplasmic-binding protein [Escherichia coli K12] | 125 | 2.9e-30
|
| paer | PA0888 [gene=aotJ] [prot=arginine/ornithine binding protein AotJ] [comment=PA0888] | 98 | 5.1e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SBP_bac_3 | 1 | Bacterial extracellular solute-binding proteins, family 3 | 68-304 | 226.8 | 2.1e-67
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_030038199.1 | ABC transporter substrate-binding protein [Streptomyces resi...
| 1205 | 1.4e-164 |
| WP_189189294.1 | ABC transporter substrate-binding protein [Streptomyces albi...
| 1201 | 6.4e-164 |
| WP_152775620.1 | ABC transporter substrate-binding protein [Streptomyces spon...
| 1199 | 1.2e-163 |
| WP_152892130.1 | ABC transporter substrate-binding protein [Streptomyces adus...
| 1189 | 3.2e-162 |
| WP_189873001.1 | ABC transporter substrate-binding protein [Streptomyces viri...
| 1189 | 3.6e-162 |
| WP_153288664.1 | ABC transporter substrate-binding protein [Streptomyces fago...
| 1188 | 4.8e-162 |
| WP_167998444.1 | ABC transporter substrate-binding protein [Streptomyces sp. ...
| 1184 | 2.3e-161 |
| WP_081219374.1 | ABC transporter substrate-binding protein [Streptomyces sp. ...
| 1184 | 2.5e-161 |
| WP_119106260.1 | ABC transporter substrate-binding protein [Streptomyces spor...
| 1181 | 6.9e-161 |
| WP_164371987.1 | ABC transporter substrate-binding protein [Streptomyces sp. ...
| 1178 | 1.6e-160 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2763 | Seems to have an uncleavable N-term signal seq
|