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IDSAVERM_3000 TypeCDS
From3757201 nt length462
To3757662 aa length153
Gene pI10.56
Definitionputative AraC-family transcriptional regulator M.W (Da)16874
NotePF00165: Bacterial regulatory helix-turn-helix proteins, AraC family AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6518 putative transcriptional regulator2101.0e-71
sgrSGR_4771 putative AraC-family transcriptional regulator1877.0e-63
samSAM23877_6224 Transcriptional regulator2107.0e-72
scabSCAB29991 putative AraC-family transcriptional regulator2155.0e-74
saceSACE_3703 transcriptional regulator, AraC family1712.0e-56
nfarnfa43930 transcriptional regulator1728.9e-45

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain30-10981.34.1e-23

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family20-57, 72-10760.31.2e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055492500.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6362.1e-83
WP_103839287.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6265.6e-82
WP_200419261.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6222.2e-81
WP_071369130.1 helix-turn-helix transcriptional regulator [Streptomyces col... 6222.3e-81
WP_234514202.1 helix-turn-helix transcriptional regulator [Streptomyces glo... 6213.6e-81
GHK00970.1 transcriptional regulator [Streptomyces sp. Y2F8-2] 6204.3e-81
WP_095852657.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 6143.7e-80
WP_054228117.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6136.0e-80
6068.6e-79
WP_059128832.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6069.1e-79

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3010 Seems to have no N-terminal signal seq.