| ID | SAVERM_3008
| Type | CDS
|
| From | 3764080
| nt length | 678
|
| To | 3764757
| aa length | 225
|
| Gene |
| pI | 6.75
|
| Definition | hypothetical protein
| M.W (Da) | 24807
|
| Note | PF01510: N-acetylmuramoyl-L-alanine amidase
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5248 hypothetical protein | 347 | 4.0e-124
|
| sgr | SGR_4848 hypothetical protein | 315 | 4.0e-110
|
| sam | SAM23877_5038 hypothetical protein | 344 | 7.0e-123
|
| scab | SCAB30051 hypothetical protein | 353 | 3.0e-126
|
| sace | SACE_1528 hypothetical protein | 90 | 2.0e-22
|
| nfar | nfa580 hypothetical protein | 68 | 3.4e-13
|
| mtub | gi|15610730 hypothetical protein Rv3594 [Mycobacterium tuberculosis H37Rv] | 75 | 3.6e-15
|
| bsub | BG14170 yxzG; hypothetical protein | 30 | 1.2e-01
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Amidase_2 | 1 | N-acetylmuramoyl-L-alanine amidase | 68-208 | 76.1 | 2.9e-21
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_235474925.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. GQFP] >...
| 971 | 1.8e-132 |
| WP_123967389.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. TLI_185...
| 965 | 1.6e-131 |
| WP_189146977.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces lacrimiflum...
| 961 | 6.5e-131 |
| WP_208607463.1 | MULTISPECIES: peptidoglycan recognition protein family prote...
| 959 | 1.3e-130 |
| WP_199924632.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. WM6386]
| 955 | 4.7e-130 |
| WP_030928978.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. NRRL S-...
| 955 | 5.5e-130 |
| WP_189189319.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces albiflavesc...
| 955 | 5.8e-130 |
|
| 952 | 1.3e-129 |
| WP_006380968.1 | MULTISPECIES: N-acetylmuramoyl-L-alanine amidase [Streptomyc...
| 951 | 1.8e-129 |
| WP_232647928.1 | N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. NR30] >...
| 951 | 1.9e-129 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3022 | Seems to have no N-terminal signal seq.
|