| ID | SAVERM_3044
| Type | CDS
|
| From | 3802556
| nt length | 324
|
| To | 3802879
| aa length | 107
|
| Gene | sugE
| pI | 8.77
|
| Definition | putative SMR-type multi-drug efflux transporter
| M.W (Da) | 11141
|
| Note | PF00893: Small Multidrug Resistance protein
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5210 putative molecular chaperone | 195 | 3.0e-67
|
| sgr | SGR_2312 putative SMR-type multi-drug efflux transporter | 189 | 5.0e-65
|
| sam | SAM23877_4998 Quaternary ammonium compound-resistance protein SugE | 197 | 7.0e-68
|
| scab | SCAB30441 putative SMR-type multi-drug efflux transporter | 192 | 3.0e-66
|
| sace | SACE_7159 small multidrug resistance protein, SMR family | 132 | 4.0e-42
|
| nfar | nfa1440 transporter | 92 | 4.8e-21
|
| bsub | BG14061 yvaE; SMR-type multidrug efflux transporter | 85 | 6.1e-19
|
| ecoli | gi|49176464 quarternary ammonium compound transport protein (SMR family) [Escherichia coli K12] | 106 | 2.9e-25
|
| paer | PA3265 [gene=PA3265] [prot=probable transporter] [comment=PA3265] | 102 | 4.9e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Multi_Drug_Res | 1 | Small Multidrug Resistance protein | 1-92 | 85.4 | 3.1e-24
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_046260463.1 | multidrug efflux SMR transporter [Streptomyces sp. WM6386] >...
| 398 | 1.8e-48 |
| WP_009308523.1 | multidrug efflux SMR transporter [Streptomyces ipomoeae] >gb...
| 396 | 3.1e-48 |
| WP_190069508.1 | multidrug efflux SMR transporter [Streptomyces lanatus] >dbj...
| 396 | 3.4e-48 |
| WP_037695074.1 | MULTISPECIES: multidrug efflux SMR transporter [Streptomyces...
| 396 | 4.2e-48 |
| WP_217239460.1 | multidrug efflux SMR transporter [Streptomyces sp. AC555_RSS...
| 396 | 4.2e-48 |
| WP_239226534.1 | multidrug efflux SMR transporter [Streptomyces sp. OfavH-34-...
| 395 | 4.4e-48 |
| WP_093721166.1 | multidrug efflux SMR transporter [Streptomyces sp. DI166] >e...
| 395 | 4.9e-48 |
| WP_055539795.1 | multidrug efflux SMR transporter [Streptomyces neyagawaensis...
| 395 | 4.9e-48 |
| WP_015657931.1 | multidrug efflux SMR transporter [Streptomyces davaonensis] ...
| 395 | 4.9e-48 |
| WP_164398555.1 | multidrug efflux SMR transporter [Streptomyces sp. SID9727] ...
| 395 | 5.0e-48 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4354 | Seems to have a cleavable N-term signal seq.
|