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IDSAVERM_3047 TypeCDS
From3806595 nt length996
To3805600 aa length331
GeneoppB2 pI10.41
Definitionputative peptide ABC transporter permease protein M.W (Da)35815
NotePF00528: Binding-protein-dependent transport system inner membrane component AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
nfarnfa1690 ABC transporter permease3101.1e-85
mtubgi|15608423 PROBABLE OLIGOPEPTIDE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER OPPB [Mycobacterium tuberculosis H37Rv]3413.5e-95

*nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component118-329112.71.5e-32

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529344.1 ABC transporter permease [Streptomyces sp. SID5469] 15370.0e+00
WP_043662952.1 ABC transporter permease [Streptomyces xylophagus] 13730.0e+00
WP_033279879.1 ABC transporter permease [Streptomyces sp. NRRL F-525] 13680.0e+00
13670.0e+00
WP_019071706.1 ABC transporter permease [Streptomyces hokutonensis] 13650.0e+00
13630.0e+00
SEF00482.1 peptide/nickel transport system permease protein [Streptomyces s... 13600.0e+00
WP_093631277.1 ABC transporter permease [Streptomyces sp. 3213.3] 13570.0e+00
WP_234468388.1 ABC transporter permease [Streptomyces sp. MBT62] 13530.0e+00
WP_236583404.1 ABC transporter permease [Streptomyces sp. MBT53] 13500.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3484 Seems to have a cleavable N-term signal seq.