| ID | SAVERM_3057
| Type | CDS
|
| From | 3820524
| nt length | 1098
|
| To | 3819427
| aa length | 365
|
| Gene |
| pI | 5.44
|
| Definition | putative secreted protein
| M.W (Da) | 38540
|
| Note | PF00595: PDZ domain (Also known as DHR or GLGF)
| AseI frg. | N
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5202 putative secreted protein | 630 | 0.0e+00
|
| sgr | SGR_2321 putative secreted protein | 550 | 0.0e+00
|
| sam | SAM23877_4987 putative secreted protein | 601 | 0.0e+00
|
| scab | SCAB30521 putative secreted protein | 624 | 0.0e+00
|
| sace | SACE_1100 PDZ/DHR/GLGF | 253 | 1.0e-82
|
| nfar | nfa45280 hypothetical protein | 252 | 3.1e-68
|
| mtub | gi|15610330 POSSIBLE CONSERVED SECRETED PROTEIN [Mycobacterium tuberculosis H37Rv] | 253 | 1.1e-68
|
| cglu | gi|19552009 COG3480:Predicted secreted protein containing a PDZ domain [Corynebacterium glutamicum] | 245 | 2.7e-66
|
| bsub | BG13364 ylbL; hypothetical protein | 155 | 4.6e-39
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PDZ_2 | 1 | PDZ domain | 138-198 | 44.4 | 1.5e-11
|
| Lon_C | 1 | Lon protease (S16) C-terminal proteolytic domain | 255-345 | 35.4 | 7.3e-09
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189189365.1 | PDZ domain-containing protein [Streptomyces albiflavescens] ...
| 1721 | 0.0e+00 |
| WP_164371943.1 | PDZ domain-containing protein [Streptomyces sp. SID14446] >g...
| 1709 | 0.0e+00 |
| WP_030379349.1 | MULTISPECIES: PDZ domain-containing protein [unclassified St...
| 1702 | 0.0e+00 |
| WP_168530135.1 | PDZ domain-containing protein [Streptomyces sp. RPA4-2] >gb
| 1698 | 0.0e+00 |
| WP_095936521.1 | PDZ domain-containing protein [Streptomyces sp. Tue6028] >gb...
| 1698 | 0.0e+00 |
| WP_099499774.1 | MULTISPECIES: PDZ domain-containing protein [Streptomyces] >...
| 1696 | 0.0e+00 |
| WP_028802029.1 | PDZ domain-containing protein [Streptomyces sp. 142MFCol3.1]
| 1696 | 0.0e+00 |
| WP_081219313.1 | PDZ domain-containing protein [Streptomyces sp. M41(2017)] >...
| 1696 | 0.0e+00 |
| WP_030594511.1 | PDZ domain-containing protein [Streptomyces fulvoviolaceus]
| 1687 | 0.0e+00 |
| WP_030038258.1 | PDZ domain-containing protein [Streptomyces resistomycificus...
| 1687 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|