| ID | SAVERM_3102
| Type | CDS
|
| From | 3876647
| nt length | 606
|
| To | 3876042
| aa length | 201
|
| Gene |
| pI | 10.32
|
| Definition | putative integral membrane protein
| M.W (Da) | 21096
|
| Note | PF01914: MarC family integral membrane protein
| AseI frg. | X
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5162 putative integral membrane protein | 339 | 4.0e-121
|
| sgr | SGR_2363 putative integral membrane protein | 309 | 3.0e-109
|
| sam | SAM23877_4942 conserved membrane protein of unknown function | 342 | 3.0e-122
|
| scab | SCAB31011 putative integral membrane protein | 328 | 1.0e-116
|
| bsub | BG14080 yvbG; similar to hypothetical proteins | 98 | 1.7e-22
|
| ecoli | gi|16129203 putative channel protein [Escherichia coli K12] | 118 | 2.4e-28
|
| paer | PA4857 [gene=PA4857] [prot=hypothetical protein] [comment=PA4857] | 78 | 4.9e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MarC | 1 | MarC family integral membrane protein | 6-197 | 159.0 | 8.8e-47
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4779 | Seems to have an uncleavable N-term signal seq
|