| ID | SAVERM_3111
| Type | CDS
|
| From | 3884344
| nt length | 597
|
| To | 3884940
| aa length | 198
|
| Gene |
| pI | 7.69
|
| Definition | hypothetical protein
| M.W (Da) | 22997
|
| Note | PF06210: Protein of unknown function (DUF1003)
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5153 putative integral membrane protein | 300 | 7.0e-106
|
| sgr | SGR_2372 conserved hypothetical protein | 275 | 4.0e-96
|
| sam | SAM23877_4932 Integral membrane protein | 302 | 1.0e-106
|
| scab | SCAB31091 hypothetical protein | 301 | 2.0e-106
|
| nfar | nfa47180 hypothetical protein | 157 | 4.5e-40
|
| mtub | gi|15608371 PROBABLE MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 149 | 9.6e-38
|
| cglu | gi|19552350 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 142 | 1.4e-35
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF1003 | 1 | Protein of unknown function (DUF1003) | 56-157 | 143.0 | 2.7e-42
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_217460131.1 | DUF1003 domain-containing protein [Streptomyces sp. BV286] >...
| 886 | 6.2e-120 |
| WP_189190167.1 | DUF1003 domain-containing protein [Streptomyces albiflavesce...
| 879 | 5.5e-119 |
| WP_095936468.1 | DUF1003 domain-containing protein [Streptomyces sp. Tue6028]...
| 869 | 1.9e-117 |
| WP_028801978.1 | DUF1003 domain-containing protein [Streptomyces sp. 142MFCol...
| 862 | 2.5e-116 |
| WP_037620718.1 | DUF1003 domain-containing protein [Streptomyces aureus]
| 862 | 2.9e-116 |
| WP_016437832.1 | DUF1003 domain-containing protein [Streptomyces sp. HGB0020]...
| 858 | 1.2e-115 |
| WP_143636555.1 | DUF1003 domain-containing protein [Streptomyces sp. IB201691...
| 853 | 5.8e-115 |
| WP_053746211.1 | DUF1003 domain-containing protein [Streptomyces sp. NRRL WC-...
| 850 | 2.1e-114 |
|
| 848 | 4.0e-114 |
| WP_108013984.1 | MULTISPECIES: DUF1003 domain-containing protein [unclassifie...
| 845 | 1.0e-113 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3845 | Seems to have no N-terminal signal seq.
|