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IDSAVERM_314 TypeCDS
From372788 nt length279
To373066 aa length92
Gene pI10.64
Definitionputative IS3 IS1372-like family transposase M.W (Da)10495
NoteIS3 family (372707..374011) Inverted repeat sequence (10/11 bp). Target sequence (CC); Translation will be controlled by the frameshift with SAV315. AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categorytransposon & IS

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB81311 putative transposase1786.0e-61
saceSACE_5121 IS3 family transposase1163.0e-36
nfarnfa44380 transposase341.7e-03
mtubgi|15610610 POSSIBLE TRANSPOSASE FOR INSERTION ELEMENT IS6110 [FIRST PART] [Mycobacterium tuberculosis H37Rv]772.1e-16
cglugi|19552938 COG2963:Transposase [Corynebacterium glutamicum]422.4e-06
paerPA0979 [gene=PA0979] [prot=conserved hypothetical protein] [comment=PA0979]326.5e-03

*scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_Tnp_11Transposase2-7146.04.5e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_046704780.1 transposase [Streptomyces europaeiscabiei] 4594.2e-58
WP_181802966.1 MULTISPECIES: transposase [unclassified Streptomyces] >lcl 4577.9e-58
WP_189788820.1 transposase, partial [Streptomyces capitiformicae] 4551.5e-57
WP_179436216.1 MULTISPECIES: transposase [Streptomyces] >gb 4551.5e-57
WP_179201442.1 transposase [Streptomyces scabiei] 4551.5e-57
WP_220647995.1 transposase [Streptomyces sp. MG28] >gb 4533.2e-57
QDN84585.1 transposase [Streptomyces sp. RLB3-6] >gb 4553.3e-57
PQM23973.1 hypothetical protein Sfr7A_10385 [Streptomyces xinghaiensis] >gb 4543.6e-57
WP_012998098.1 MULTISPECIES: transposase [unclassified Streptomyces] >emb 4523.8e-57
4543.9e-57

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1086 Seems to have no N-terminal signal seq.