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IDSAVERM_3141 TypeCDS
From3913789 nt length870
To3914658 aa length289
Gene pI5.83
Definitionputative DNA-binding protein M.W (Da)32122
NotePF01381: Helix-turn-helix AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4678 conserved hypothetical protein4382.0e-157
sgrSGR_4333 putative DNA-binding protein3765.0e-133
samSAM23877_3863 DNA-binding protein4461.0e-160
scabSCAB65891 putative DNA-binding protein2211.0e-71

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain34-8744.21.7e-11

HTH_31Helix-turn-helix37-8525.31.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
OQR61732.1 transcriptional regulator [Streptomyces sp. B9173] 13510.0e+00
WP_200744435.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13490.0e+00
WP_200724840.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13410.0e+00
WP_109002810.1 helix-turn-helix transcriptional regulator [Streptomyces ris... 13290.0e+00
WP_037680434.1 helix-turn-helix domain-containing protein [Streptomyces gri... 13180.0e+00
WP_200419407.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12841.4e-177
WP_153288794.1 helix-turn-helix domain-containing protein [Streptomyces fag... 12762.3e-176
WP_200704879.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12468.0e-172
WP_081219232.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12468.8e-172
WP_058924616.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12442.0e-171

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4371 Seems to have no N-terminal signal seq.