| ID | SAVERM_3146
| Type | CDS
|
| From | 3919703
| nt length | 984
|
| To | 3918720
| aa length | 327
|
| Gene | oppD4
| pI | 6.18
|
| Definition | putative peptide ABC transporter ATP-binding protein
| M.W (Da) | 35716
|
| Note | PF00005: ABC transporter
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5120 putative peptide transport system ATP-binding protein | 597 | 0.0e+00
|
| sgr | SGR_2410 putative peptide ABC transporter ATP-binding protein | 567 | 0.0e+00
|
| sam | SAM23877_4904 oligopeptide transporter subunit, ATP-binding component of ABC superfamily | 603 | 0.0e+00
|
| scab | SCAB31401 putative peptide ABC transporter ATP-binding protein | 605 | 0.0e+00
|
| sace | SACE_0847 oligopeptide ABC transporter ATP-binding protein | 454 | 3.0e-162
|
| bsub | BG10845 dppD, dciAD; dipeptide transport system ATP-binding protein | 335 | 1.7e-93
|
| ecoli | gi|49176090 oligopeptide transporter ATP-binding component [Escherichia coli K12] | 331 | 4.6e-92
|
| paer | PA4505 [gene=PA4505] [prot=probable ATP-binding component of ABC transporter] [comment=PA4505] | 305 | 4.9e-84
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 23-181 | 91.7 | 5.3e-26
|
| oligo_HPY | 1 | Oligopeptide/dipeptide transporter, C-terminal region | 233-297 | 75.8 | 2.6e-21
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_003998169.1 | ABC transporter ATP-binding protein [Streptomyces viridochro...
| 1527 | 0.0e+00 |
| WP_062150145.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1526 | 0.0e+00 |
| WP_108013950.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1518 | 0.0e+00 |
| WP_217455908.1 | ABC transporter ATP-binding protein [Streptomyces sp. BV286]...
| 1517 | 0.0e+00 |
| WP_057603257.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1516 | 0.0e+00 |
| WP_189147085.1 | ABC transporter ATP-binding protein [Streptomyces lacrimiflu...
| 1516 | 0.0e+00 |
| WP_073940202.1 | ABC transporter ATP-binding protein [Streptomyces sp. TSRI01...
| 1516 | 0.0e+00 |
| WP_030929342.1 | ABC transporter ATP-binding protein [Streptomyces sp. NRRL S...
| 1515 | 0.0e+00 |
| WP_123967281.1 | ABC transporter ATP-binding protein [Streptomyces sp. TLI_18...
| 1514 | 0.0e+00 |
| WP_030594759.1 | ABC transporter ATP-binding protein [Streptomyces fulvoviola...
| 1513 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2423 | Seems to have no N-terminal signal seq.
|