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IDSAVERM_3174 TypeCDS
From3950236 nt length981
To3949256 aa length326
GenebldKC2 pI8.36
Definitionputative peptide ABC transporter permease protein M.W (Da)36124
NoteoppB6, PF00528: Binding-protein-dependent transport system inner membrane component AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5114 bldKC BldKC putative ABC transport system integral membrane protein4002.0e-141
samSAM23877_4893 ABC transporter, permease protein4032.0e-142
scabSCAB31521 putative peptide ABC transporter permease protein3904.0e-137

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component125-324123.57.5e-36

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_164372066.1 ABC transporter permease [Streptomyces sp. SID14446] >gb 15700.0e+00
WP_151469879.1 ABC transporter permease [Streptomyces triticiradicis] >lcl 15670.0e+00
WP_103547970.1 ABC transporter permease [Streptomyces populi] >gb 15640.0e+00
WP_081219195.1 ABC transporter permease [Streptomyces sp. M41(2017)] >gb 15580.0e+00
WP_037620678.1 ABC transporter permease [Streptomyces aureus] 15540.0e+00
15050.0e+00
WP_189267726.1 ABC transporter permease [Streptomyces fuscichromogenes] >db... 15010.0e+00
WP_235455105.1 ABC transporter permease [Streptomyces olivochromogenes] >lc... 14990.0e+00
WP_129306902.1 ABC transporter permease [Streptomyces sp. L2] 14970.0e+00
WP_046589969.1 ABC transporter permease [Streptomyces mangrovisoli] >gb 14950.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.5925 Seems to have an uncleavable N-term signal seq