| ID | SAVERM_3218
| Type | CDS
|
| From | 4008701
| nt length | 1677
|
| To | 4010377
| aa length | 558
|
| Gene | fumB
| pI | 4.81
|
| Definition | putative fumarate hydratase class I
| M.W (Da) | 60611
|
| Note | PF05681: Fumarate hydratase (Fumerase)
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | TCA cycle
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5044 fumB fumarate hydratase class I | 1122 | 0.0e+00
|
| sgr | SGR_2481 putative fumarate hydratase class I | 1067 | 0.0e+00
|
| sam | SAM23877_4845 anaerobic class I fumarate hydratase (fumarase B) | 1121 | 0.0e+00
|
| scab | SCAB33551 putative fumarate hydratase class I | 1114 | 0.0e+00
|
| sace | SACE_1784 fumarate hydratase class I | 850 | 0.0e+00
|
| nfar | nfa32060 fumA fumarate hydratase | 877 | 0.0e+00
|
| ecoli | gi|16131948 fumarase B (fumarate hydratase class I), anaerobic isozyme [Escherichia coli K12] | 714 | 0.0e+00
|
| paer | PA4333 [gene=PA4333] [prot=probable fumarase] [comment=PA4333] | 191 | 1.1e-49
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Fumerase_C | 1 | Fumarase C-terminus | 333-540 | 310.4 | 4e-93
|
| Fumerase | 1 | Fumarate hydratase (Fumerase) | 50-327 | 297.9 | 6.2e-89
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
|
| 2918 | 0.0e+00 |
| RSN53165.1 | fumarate hydratase [Streptomyces sp. WAC 04229]
| 2912 | 0.0e+00 |
| QFZ74513.1 | fumarate hydratase [Streptomyces fagopyri]
| 2910 | 0.0e+00 |
|
| 2908 | 0.0e+00 |
| GGQ04244.1 | fumarate hydratase class I [Streptomyces mutabilis]
| 2908 | 0.0e+00 |
| MPY37784.1 | fumarate hydratase [Streptomyces adustus]
| 2908 | 0.0e+00 |
| PAK22800.1 | fumarate hydratase [Streptomyces sp. alain-838]
| 2908 | 0.0e+00 |
| GGN82377.1 | fumarate hydratase class I [Streptomyces albiflavescens]
| 2905 | 0.0e+00 |
|
| 2902 | 0.0e+00 |
| PAM98843.1 | fumarate hydratase [Streptomyces sp. Alain-F2R5]
| 2902 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4805 | Seems to have no N-terminal signal seq.
|