| ID | SAVERM_3221
| Type | CDS
|
| From | 4014275
| nt length | 1404
|
| To | 4015678
| aa length | 467
|
| Gene | fumC
| pI | 5.05
|
| Definition | putative fumarate hydratase C
| M.W (Da) | 49801
|
| Note | PF00206: Lyase
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | TCA cycle
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5042 fumC fumarate hydratase C | 847 | 0.0e+00
|
| sgr | SGR_2491 putative fumarate hydratase C | 776 | 0.0e+00
|
| sam | SAM23877_4844 fumarate hydratase (fumarase C), aerobic Class II | 837 | 0.0e+00
|
| scab | SCAB33571 putative fumarate hydratase C | 833 | 0.0e+00
|
| sace | SACE_0930 fumarase C (fumarate hydratase class II) | 652 | 0.0e+00
|
| nfar | nfa48010 fumC fumarate hydratase | 599 | 1.4e-172
|
| mtub | gi|15608238 fumarate hydratase [Mycobacterium tuberculosis H37Rv] | 560 | 5.6e-161
|
| cglu | gi|19552231 COG0114:Fumarase [Corynebacterium glutamicum] | 551 | 3.1e-158
|
| bsub | BG10384 citG; fumarate hydratase [EC:4.2.1.2] | 397 | 5.5e-112
|
| ecoli | gi|16129569 fumarate hydratase [Escherichia coli K12] | 425 | 2.8e-120
|
| paer | PA4470 [gene=fumC1] [prot=fumarate hydratase] [comment=PA4470] | 453 | 1.3e-128
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Lyase_1 | 1 | Lyase | 18-342 | 343.0 | 1.6e-102
|
| FumaraseC_C | 1 | Fumarase C C-terminus | 408-466 | 79.2 | 2.1e-22
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3914 | Seems to have no N-terminal signal seq.
|