| ID | SAVERM_3227
| Type | CDS
|
| From | 4024176
| nt length | 264
|
| To | 4024439
| aa length | 87
|
| Gene |
| pI | 11.83
|
| Definition | hypothetical protein
| M.W (Da) | 9367
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5037 hypothetical protein | 94 | 1.0e-27
|
| sgr | SGR_2496 hypothetical protein | 105 | 7.0e-32
|
| sam | SAM23877_4839 hypothetical protein | 89 | 2.0e-25
|
| scab | SCAB5571 hypothetical protein | 113 | 5.0e-35
|
| sace | SACE_2651 hypothetical protein | 90 | 3.0e-26
|
| nfar | nfa18950 hypothetical protein | 68 | 8.1e-14
|
| cglu | gi|19554026 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 82 | 2.2e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;
Pfam search result
no hits.
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_081219155.1 | hypothetical protein [Streptomyces sp. M41(2017)] >gb
| 220 | 5.1e-22 |
| WP_143636690.1 | hypothetical protein [Streptomyces sp. IB201691-2A2] >lcl
| 217 | 1.5e-21 |
| NGO09849.1 | hypothetical protein [Streptomyces scabichelini]
| 217 | 1.6e-21 |
| WP_171059979.1 | hypothetical protein [Streptomyces montanus]
| 213 | 6.4e-21 |
| WP_179272499.1 | hypothetical protein [Streptomyces sp. XY006]
| 213 | 8.6e-21 |
| WP_119100151.1 | hypothetical protein [Streptomyces sporangiiformans] >lcl
| 212 | 9.6e-21 |
|
| 208 | 5.7e-20 |
| WP_037678590.1 | hypothetical protein [Streptomyces griseus]
| 206 | 7.5e-20 |
| OXS33647.1 | hypothetical protein CHR28_20370 [Streptomyces sp. XY006]
| 208 | 8.1e-20 |
| GCB46314.1 | hypothetical protein SNL152K_3612 [Streptomyces sp. NL15-2K]
| 206 | 8.3e-20 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4885 | Seems to have no N-terminal signal seq.
|