| ID | SAVERM_3234
| Type | CDS
|
| From | 4031876
| nt length | 1323
|
| To | 4030554
| aa length | 440
|
| Gene |
| pI | 7.89
|
| Definition | putative integral membrane protein
| M.W (Da) | 46546
|
| Note | PF01594: Domain of unknown function DUF20
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5030 putative integral membrane protein | 655 | 0.0e+00
|
| sgr | SGR_2503 putative integral membrane protein | 612 | 0.0e+00
|
| sam | SAM23877_4832 putative integral membrane protein | 636 | 0.0e+00
|
| scab | SCAB33701 putative integral membrane protein | 594 | 0.0e+00
|
| sace | SACE_7364 protein of unknown function UPF0118 | 245 | 7.0e-78
|
| nfar | nfa54930 hypothetical protein | 276 | 3.3e-75
|
| mtub | gi|15607346 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 268 | 5.3e-73
|
| cglu | gi|19553991 COG0628:Predicted permease [Corynebacterium glutamicum] | 204 | 6.6e-54
|
| bsub | BG13950 yubA; similar to hypothetical proteins | 116 | 3.0e-27
|
| ecoli | gi|49176360 putative permease (PerM family) [Escherichia coli K12] | 100 | 2.5e-22
|
| paer | PA1007 [gene=PA1007] [prot=conserved hypothetical protein] [comment=PA1007] | 92 | 9.3e-20
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AI-2E_transport | 1 | AI-2E family transporter | 84-408 | 199.6 | 6.8e-59
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5479 | Seems to have no N-terminal signal seq.
|