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IDSAVERM_3239 TypeCDS
From4037259 nt length1161
To4038419 aa length386
Gene pI7.8
Definitionhypothetical protein M.W (Da)41717
NotePF06224: Protein of unknown function (DUF1006) AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5027 hypothetical protein4914.0e-175
samSAM23877_4827 hypothetical protein5051.0e-180
scabSCAB33661 hypothetical protein1478.0e-44
nfarnfa26740 hypothetical protein1081.0e-24

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_421Winged helix DNA-binding domain35-367202.31.3e-59

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189190068.1 winged helix DNA-binding domain-containing protein [Streptom... 14030.0e+00
WP_028803079.1 winged helix DNA-binding domain-containing protein [Streptom... 13850.0e+00
WP_095936369.1 winged helix DNA-binding domain-containing protein [Streptom... 13830.0e+00
WP_210577097.1 winged helix DNA-binding domain-containing protein [Streptom... 13820.0e+00
WP_075028701.1 winged helix DNA-binding domain-containing protein [Streptom... 13700.0e+00
WP_143609122.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 13670.0e+00
WP_126394651.1 winged helix DNA-binding domain-containing protein [Streptom... 13660.0e+00
WP_037694757.1 winged helix DNA-binding domain-containing protein [Streptom... 13660.0e+00
WP_046707504.1 winged helix DNA-binding domain-containing protein [Streptom... 13650.0e+00
WP_119580694.1 winged helix DNA-binding domain-containing protein [Streptom... 13630.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1761 Seems to have no N-terminal signal seq.