| ID | SAVERM_3287
| Type | CDS
|
| From | 4091318
| nt length | 1824
|
| To | 4089495
| aa length | 607
|
| Gene | pckA
| pI | 4.57
|
| Definition | putative phosphoenolpyruvate carboxykinase
| M.W (Da) | 67144
|
| Note | PF00821: Phosphoenolpyruvate carboxykinase
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | main glycolytic pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4979 putative phosphoenolpyruvate carboxykinase | 1150 | 0.0e+00
|
| sgr | SGR_2556 putative phosphoenolpyruvate carboxykinase | 1137 | 0.0e+00
|
| sam | SAM23877_4794 Phosphoenolpyruvate carboxykinase GTP | 1162 | 0.0e+00
|
| scab | SCAB34111 putative phosphoenolpyruvate carboxykinase | 1165 | 0.0e+00
|
| sace | SACE_7274 phosphoenolpyruvate carboxykinase (GTP) | 844 | 0.0e+00
|
| nfar | nfa54790 pckA phosphoenolpyruvate carboxykinase | 852 | 0.0e+00
|
| mtub | gi|15607352 phosphoenolpyruvate carboxykinase (GTP) [Mycobacterium tuberculosis H37Rv] | 849 | 0.0e+00
|
| cglu | gi|19554053 COG1274:Phosphoenolpyruvate carboxykinase (GTP) [Corynebacterium glutamicum] | 735 | 0.0e+00
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PEPCK_C | 1 | Phosphoenolpyruvate carboxykinase C-terminal P-loop domain | 247-606 | 579.2 | 2.5e-174
|
| PEPCK_N | 1 | Phosphoenolpyruvate carboxykinase N-terminal domain | 21-243 | 334.3 | 2.7e-100
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_103552063.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces populi...
| 3046 | 0.0e+00 |
| WP_037620598.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces aureus...
| 3042 | 0.0e+00 |
| WP_168529965.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces sp. RP...
| 3040 | 0.0e+00 |
| WP_151469956.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces tritic...
| 3038 | 0.0e+00 |
| WP_055614156.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces phaeoc...
| 3035 | 0.0e+00 |
| WP_202498065.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces sp. SI...
| 3034 | 0.0e+00 |
| WP_081219111.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces sp. M4...
| 3032 | 0.0e+00 |
| WP_153288888.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces fagopy...
| 3031 | 0.0e+00 |
| WP_217568161.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces sp. Gb...
| 3031 | 0.0e+00 |
| WP_075032323.1 | phosphoenolpyruvate carboxykinase (GTP) [Streptomyces mirabi...
| 3030 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2000 | Seems to have no N-terminal signal seq.
|