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IDSAVERM_3315 TypeCDS
From4126449 nt length912
To4127360 aa length303
Gene pI8.27
Definitionputative DNA-binding protein M.W (Da)33970
NotePF01381: Helix-turn-helix AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4944 putative DNA-binding protein4541.0e-163
sgrSGR_6891 putative transcriptional regulator4542.0e-163
samSAM23877_4766 DNA-binding protein4483.0e-161
scabSCAB34431 putative DNA-binding protein4683.0e-169
saceSACE_1844 transcriptional regulator, XRE family3084.0e-106
cglugi|19552569 COG1396:Predicted transcriptional regulators [Corynebacterium glutamicum]2245.1e-60
bsubBG11346 licR, celR; transcriptional regulator (antiterminator). regulation of the lichenan operon (licBCAH) (lichenan degradation products utilization)292.3e-01

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain20-10063.91.2e-17

HTH_31Helix-turn-helix50-9237.32e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_190172184.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13830.0e+00
WP_168494990.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13830.0e+00
WP_075032371.1 helix-turn-helix transcriptional regulator [Streptomyces mir... 13780.0e+00
QIY97945.1 helix-turn-helix domain-containing protein [Streptomyces sp. S1D4... 13750.0e+00
WP_189189983.1 helix-turn-helix transcriptional regulator [Streptomyces alb... 13660.0e+00
WP_097286021.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13650.0e+00
WP_067368018.1 helix-turn-helix transcriptional regulator [Streptomyces oli... 13640.0e+00
SOE30069.1 Helix-turn-helix domain-containing protein [Streptomyces sp. OK2... 13630.0e+00
WP_181650211.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13620.0e+00
WP_054234751.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 13610.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4799 Seems to have no N-terminal signal seq.