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IDSAVERM_3326 TypeCDS
From4140947 nt length1092
To4139856 aa length363
Gene pI7.72
Definitionputative secreted protein M.W (Da)39207
NotePF00990: GGDEF domain AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4931 putative secreted protein5740.0e+00
sgrSGR_2612 putative secreted protein5400.0e+00
samSAM23877_4752 hypothetical protein5570.0e+00
scabSCAB34511 hypothetical protein5041.0e-180

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GGDEF1Diguanylate cyclase, GGDEF domain174-32491.93.3e-26

GAF1GAF domain103-15924.63e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_164374072.1 sensor domain-containing diguanylate cyclase [Streptomyces s... 14830.0e+00
GGX39402.1 sensor domain-containing diguanylate cyclase [Streptomyces fruct... 14820.0e+00
WP_081219079.1 sensor domain-containing diguanylate cyclase [Streptomyces s... 14820.0e+00
WP_229915962.1 sensor domain-containing diguanylate cyclase [Streptomyces f... 14810.0e+00
WP_151480837.1 diguanylate cyclase [Streptomyces albicerus] 14810.0e+00
WP_200418993.1 sensor domain-containing diguanylate cyclase [Streptomyces s... 14650.0e+00
WP_093611820.1 sensor domain-containing diguanylate cyclase [Streptomyces i... 14580.0e+00
WP_099499549.1 MULTISPECIES: sensor domain-containing diguanylate cyclase [... 14560.0e+00
WP_200396185.1 sensor domain-containing diguanylate cyclase [Streptomyces s... 14540.0e+00
WP_200690690.1 sensor domain-containing diguanylate cyclase [Streptomyces s... 14510.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1150 Seems to have no N-terminal signal seq.