| ID | SAVERM_3337
| Type | CDS
|
| From | 4150323
| nt length | 1773
|
| To | 4152095
| aa length | 590
|
| Gene | accA3
| pI | 4.8
|
| Definition | putative acyl-CoA carboxylase, alpha subunit
| M.W (Da) | 62229
|
| Note | PF02786: Carbamoyl-phosphate synthase L chain, ATP binding domain
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6271 SCAH10.36c accA1 putative acyl-CoA carboxylase complex (partial) | 1111 | 0.0e+00
|
| sgr | SGR_2621 "putative acyl-CoA carboxylase, alpha subunit" | 1040 | 0.0e+00
|
| sam | SAM23877_4742 Acetyl-/propionyl-coenzyme A carboxylase alpha chain | 1127 | 0.0e+00
|
| scab | SCAB34621 putative acyl-CoA carboxylase, alpha subunit | 1090 | 0.0e+00
|
| sace | SACE_6509 acetyl/propionyl-CoA carboxylase alpha subunit | 761 | 0.0e+00
|
| nfar | nfa9890 acyl-CoA carboxylase alpha subunit | 770 | 0.0e+00
|
| mtub | gi|15610421 PROBABLE BIFUNCTIONAL PROTEIN ACETYL-/PROPIONYL-COENZYME A CARBOXYLASE (ALPHA CHAIN) ACCA3: BIOTIN CARBOXYLASE + BIOTIN CARBOXYL CARRIER PROTEIN (BCCP) [Mycobacterium tuberculosis H37Rv] | 798 | 0.0e+00
|
| cglu | gi|19551930 COG0439:Biotin carboxylase [Corynebacterium glutamicum] | 731 | 0.0e+00
|
| paer | PA5436 [gene=PA5436] [prot=probable biotin carboxylase subunit of a transcarboxylase] [comment=PA5436] | 395 | 7.2e-111
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CPSase_L_D2 | 1 | Carbamoyl-phosphate synthase L chain, ATP binding domain | 114-320 | 249.0 | 3e-74
|
| Biotin_carb_N | 1 | Biotin carboxylase, N-terminal domain | 2-109 | 152.8 | 4e-45
|
| Biotin_carb_C | 1 | Biotin carboxylase C-terminal domain | 333-447 | 123.5 | 3.4e-36
|
| Biotin_lipoyl | 1 | Biotin-requiring enzyme | 522-588 | 58.8 | 3.4e-16
|
| ATP-grasp | 1 | ATP-grasp domain | 140-291 | 29.8 | 3.5e-07
|
| Biotin_lipoyl_2 | 1 | Biotin-lipoyl like | 522-554 | 27.2 | 2.4e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497438.1 | ATP-grasp domain-containing protein [Streptomyces sp. SID546...
| 2768 | 0.0e+00 |
| WP_097286011.1 | MULTISPECIES: biotin/lipoyl-binding protein [unclassified St...
| 2678 | 0.0e+00 |
| WP_143602741.1 | MULTISPECIES: biotin/lipoyl-binding protein [unclassified St...
| 2675 | 0.0e+00 |
| WP_095852908.1 | ATP-grasp domain-containing protein [Streptomyces sp. Ag82_O...
| 2675 | 0.0e+00 |
| WP_030842355.1 | biotin/lipoyl-binding protein [Streptomyces sp. NRRL S-475]
| 2673 | 0.0e+00 |
| WP_077796952.1 | biotin/lipoyl-binding protein [Streptomyces sp. JHA26]
| 2672 | 0.0e+00 |
| WP_097224955.1 | ATP-grasp domain-containing protein [Streptomyces sp. OV198]...
| 2668 | 0.0e+00 |
| WP_181650221.1 | ATP-grasp domain-containing protein [Streptomyces sp. WAC002...
| 2668 | 0.0e+00 |
| WP_168494962.1 | MULTISPECIES: ATP-grasp domain-containing protein [Streptomy...
| 2666 | 0.0e+00 |
| WP_104777697.1 | MULTISPECIES: biotin/lipoyl-binding protein [Streptomyces] >...
| 2665 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1484 | Seems to have no N-terminal signal seq.
|