| ID | SAVERM_3342
| Type | CDS
|
| From | 4157159
| nt length | 825
|
| To | 4157983
| aa length | 274
|
| Gene | deoD
| pI | 5.14
|
| Definition | putative purine nucleoside phosphorylase
| M.W (Da) | 28598
|
| Note | PF00896: Phosphorylase family 2
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4917 putative purine nucleoside phosphorylase | 501 | 0.0e+00
|
| sgr | SGR_2626 putative purine nucleoside phosphorylase | 482 | 3.0e-175
|
| sam | SAM23877_4738 Purine nucleoside phosphorylase | 504 | 0.0e+00
|
| scab | SCAB34681 putative purine nucleoside phosphorylase | 519 | 0.0e+00
|
| sace | SACE_6547 purine-nucleoside phosphorylase | 332 | 5.0e-116
|
| nfar | nfa9610 purine nucleoside phosphorylase | 290 | 9.4e-80
|
| mtub | gi|15610443 purine nucleoside phosphorylase [Mycobacterium tuberculosis H37Rv] | 318 | 3.2e-88
|
| cglu | gi|19552927 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 27 | 6.1e-01
|
| bsub | BG11330 pupG, pnp, yqkO; purine-nucleoside phosphorylase [EC:2.4.2.1] | 166 | 1.8e-42
|
| ecoli | gi|16130333 purine nucleoside phosphorylase [Escherichia coli K12] | 154 | 6.2e-39
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PNP_UDP_1 | 1 | Phosphorylase superfamily | 36-271 | 142.2 | 1.4e-41
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_062150704.1 | MULTISPECIES: purine-nucleoside phosphorylase [Streptomyces]...
| 1348 | 0.0e+00 |
| WP_003998393.1 | purine-nucleoside phosphorylase [Streptomyces viridochromoge...
| 1345 | 0.0e+00 |
| WP_030165638.1 | MULTISPECIES: purine-nucleoside phosphorylase [Streptomyces]...
| 1339 | 0.0e+00 |
| WP_234850899.1 | purine-nucleoside phosphorylase [Streptomyces indiaensis] >l...
| 1338 | 0.0e+00 |
| NEA99719.1 | purine-nucleoside phosphorylase [Streptomyces sp. SID13726]
| 1338 | 0.0e+00 |
| WP_102913636.1 | purine-nucleoside phosphorylase [Streptomyces cahuitamycinic...
| 1338 | 0.0e+00 |
| WP_099505497.1 | MULTISPECIES: purine-nucleoside phosphorylase [Streptomyces]...
| 1338 | 0.0e+00 |
| WP_217209247.1 | purine-nucleoside phosphorylase [Streptomyces sp. AC550_RSS8...
| 1337 | 0.0e+00 |
| WP_190049663.1 | purine-nucleoside phosphorylase [Streptomyces lomondensis] >...
| 1337 | 0.0e+00 |
| WP_067249689.1 | purine-nucleoside phosphorylase [Streptomyces sp. DSM 15324]...
| 1337 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1065 | Seems to have no N-terminal signal seq.
|