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IDSAVERM_3356 TypeCDS
From4172399 nt length204
To4172602 aa length67
Gene pI11.26
Definitionhypothetical protein M.W (Da)7353
NotePF04024: PspC domain AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4903 putative membrane protein993.0e-30
sgrSGR_2639 conserved hypothetical protein834.0e-24
samSAM23877_4723 Membrane protein984.0e-30
scabSCAB34841 hypothetical protein1135.0e-36
saceSACE_7288 hypothetical protein726.0e-20
nfarnfa8710 hypothetical protein672.5e-13

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PspC1PspC domain5-5859.51.9e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189191672.1 PspC domain-containing protein [Streptomyces albiflavescens]... 3181.5e-37
WP_103550199.1 MULTISPECIES: PspC domain-containing protein [Streptomyces] ... 3163.3e-37
WP_081219053.1 MULTISPECIES: PspC domain-containing protein [unclassified S... 3163.4e-37
WP_037625636.1 PspC domain-containing protein [Streptomyces aureus] 3163.4e-37
WP_062640628.1 PspC domain-containing protein [Streptomyces sp. NBRC 110468... 3147.6e-37
WP_053751512.1 PspC domain-containing protein [Streptomyces sp. MMG1533] >g... 3147.6e-37
WP_037861070.1 PspC domain-containing protein [Streptomyces sp. NRRL S-340] 3131.0e-36
WP_109002954.1 PspC domain-containing protein [Streptomyces rishiriensis] 3121.3e-36
WP_201055168.1 PspC domain-containing protein [Streptomyces sp. MBT53] >lcl... 3121.5e-36
WP_030682813.1 PspC domain-containing protein [Streptomyces cellulosae] 3111.8e-36

PSORT result

LocalizationCertaintyPSORT said
membrane0.1808 Seems to have a cleavable N-term signal seq.