| ID | SAVERM_3361
| Type | CDS
|
| From | 4176312
| nt length | 1293
|
| To | 4177604
| aa length | 430
|
| Gene |
| pI | 11.1
|
| Definition | putative transport integral membrane protein
| M.W (Da) | 43717
|
| Note | PF07690: Major Facilitator Superfamily
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4896 putative transport integral membrane protein | 632 | 0.0e+00
|
| sgr | SGR_2644 putative permease of the major facilitator superfamily | 566 | 0.0e+00
|
| sam | SAM23877_4718 Inner membrane transport protein YnfM | 639 | 0.0e+00
|
| scab | SCAB34901 putative transport integral membrane protein | 590 | 0.0e+00
|
| sace | SACE_1032 transport integral membrane protein | 186 | 2.0e-55
|
| nfar | nfa14300 transporter | 290 | 2.2e-79
|
| cglu | gi|19554114 COG0477:Permeases of the major facilitator superfamily [Corynebacterium glutamicum] | 254 | 7.1e-69
|
| bsub | BG10025 yybF; similar to antibiotic resistance protein | 253 | 2.0e-68
|
| ecoli | gi|16129554 putative transport protein [Escherichia coli K12] | 275 | 3.2e-75
|
| paer | PA5030 [gene=PA5030] [prot=probable MFS transporter] [comment=PA5030] | 270 | 1.4e-73
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MFS_1 | 1 | Major Facilitator Superfamily | 44-263 | 125.6 | 1.9e-36
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5182 | Seems to have no N-terminal signal seq.
|