| ID | SAVERM_3366
| Type | CDS
|
| From | 4182195
| nt length | 417
|
| To | 4181779
| aa length | 138
|
| Gene | cdd2
| pI | 4.57
|
| Definition | putative cytidine/deoxycytidine deaminase
| M.W (Da) | 14207
|
| Note | PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4889 putative cytidine deaminase | 228 | 3.0e-79
|
| sgr | SGR_2650 putative cytidine deaminase | 216 | 2.0e-74
|
| sam | SAM23877_4711 Cytidine deaminase | 225 | 3.0e-78
|
| scab | SCAB34931 putative cytidine/deoxycytidine deaminase | 243 | 4.0e-85
|
| sace | SACE_6576 cytidine deaminase | 157 | 3.0e-51
|
| nfar | nfa9500 cytidine deaminase | 152 | 1.3e-38
|
| mtub | gi|15610451 cytidine deaminase [Mycobacterium tuberculosis H37Rv] | 154 | 1.6e-39
|
| bsub | BG10477 cdd; cytidine deaminase [EC:3.5.4.5] | 64 | 2.0e-12
|
| ecoli | gi|16130081 cytidine deaminase [Escherichia coli K12] | 38 | 1.7e-04
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| dCMP_cyt_deam_2 | 1 | Cytidine and deoxycytidylate deaminase zinc-binding region | 15-65 | 40.1 | 3.6e-10
|
| dCMP_cyt_deam_1 | 1 | Cytidine and deoxycytidylate deaminase zinc-binding region | 17-111 | 36.5 | 3e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1023 | Seems to have no N-terminal signal seq.
|