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IDSAVERM_3416 TypeCDS
From4238429 nt length582
To4237848 aa length193
Gene pI5.02
Definitionputative secreted protein M.W (Da)20571
NotePF02834: 2',5' RNA ligase family AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4840 putative secreted protein3206.0e-114
sgrSGR_2701 putative secreted protein2985.0e-105
samSAM23877_4655 2H phosphoesterase superfamily protein3184.0e-113
scabSCAB35591 hypothetical protein3304.0e-117
bsubBG13160 yjcG; hypothetical protein482.5e-07

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

2_5_RNA_ligase212'-5' RNA ligase superfamily13-15764.77.9e-18

LigT_PEase1LigT like Phosphoesterase33-8150.51.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_048587012.1 2'-5' RNA ligase family protein [Streptomyces viridochromoge... 8526.2e-115
WP_217209347.1 2'-5' RNA ligase family protein [Streptomyces sp. AC550_RSS8... 8519.8e-115
WP_166001769.1 2'-5' RNA ligase family protein [Streptomyces sp. JB150] >gb... 8473.3e-114
WP_055625304.1 MULTISPECIES: 2'-5' RNA ligase family protein [unclassified ... 8473.5e-114
WP_062721878.1 2'-5' RNA ligase family protein [Streptomyces caeruleatus] >... 8458.4e-114
WP_108708349.1 MULTISPECIES: 2'-5' RNA ligase family protein [Streptomyces]... 8441.1e-113
WP_062233258.1 2'-5' RNA ligase family protein [Streptomyces griseorubigino... 8431.3e-113
WP_115507651.1 2'-5' RNA ligase family protein [Streptomyces sp. M7] >gb 8421.8e-113
WP_141206614.1 2'-5' RNA ligase family protein [Streptomyces griseorubigino... 8388.2e-113
WP_126900971.1 2'-5' RNA ligase family protein [Streptomyces sp. WAC 01325]... 8389.1e-113

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.