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IDSAVERM_3425 TypeCDS
From4246533 nt length852
To4247384 aa length283
Gene pI7.01
Definitionputative DNA-binding protein M.W (Da)31332
NotePF01381: Helix-turn-helix AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4543 hypothetical protein3722.0e-131
scabSCAB58741 putative DNA-binding protein3633.0e-128

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-6947.12.1e-12

HTH_31Helix-turn-helix18-6827.32.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_164418713.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11241.8e-153
WP_073497639.1 helix-turn-helix transcriptional regulator [Streptomyces pha... 11172.4e-152
WP_189703419.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 11102.4e-151
WP_210579117.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10931.0e-148
WP_094217876.1 helix-turn-helix domain-containing protein [Streptomyces dia... 10921.3e-148
WP_062045992.1 helix-turn-helix transcriptional regulator [Streptomyces can... 10903.0e-148
WP_188288073.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10833.6e-147
WP_057609965.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10833.9e-147
WP_208900741.1 helix-turn-helix domain-containing protein [Streptomyces inc... 10834.2e-147
WP_055709984.1 helix-turn-helix domain-containing protein [Streptomyces pun... 10824.3e-147

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2707 Seems to have no N-terminal signal seq.