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IDSAVERM_3432 TypeCDS
From4254613 nt length1170
To4253444 aa length389
GeneproV pI4.88
Definitionputative glycine betaine ABC transporter ATP-binding protein M.W (Da)41465
NotePF00005: ABC transporter AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4830 putative glycine betaine ABC transport system ATP-binding protein5710.0e+00
sgrSGR_1082 putative glycine betaine ABC transporter ATP-binding protein5450.0e+00
samSAM23877_4645 putative glycine betaine ABC transport system ATP-binding protein5800.0e+00
scabSCAB6991 putative glycine betaine ABC transporter ATP-binding protein4395.0e-155

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter54-201121.53.3e-35

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_046261543.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13240.0e+00
WP_037886947.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13082.3e-178
ELS55753.1 putative Choline ABC transporter, ATP-binding protein [Streptomyc... 13072.9e-178
WP_215159029.1 MULTISPECIES: glycine betaine/L-proline ABC transporter ATP-... 13056.5e-178
WP_062150961.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13046.9e-178
WP_171147288.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13031.1e-177
WP_103837454.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13091.7e-177
WP_031477607.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13012.4e-177
WP_199921358.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13002.9e-177
WP_189933573.1 glycine betaine/L-proline ABC transporter ATP-binding protei... 13021.0e-176

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1839 Seems to have no N-terminal signal seq.