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IDSAVERM_3472 TypeCDS
From4303934 nt length1437
To4305370 aa length478
Gene pI6
Definitionhypothetical protein M.W (Da)49507
NotePF04024: PspC domain AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4790 SCD63A.01c putative integral membrane protein5950.0e+00
sgrSGR_2740 conserved hypothetical protein3718.0e-126
samSAM23877_4606 Integral membrane protein5091.0e-180
scabSCAB35981 hypothetical protein5440.0e+00
nfarnfa9000 hypothetical protein732.8e-14
cglugi|19551843 COG1983:Putative stress-responsive transcriptional regulator [Corynebacterium glutamicum]516.1e-08

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PspC1PspC domain64-11957.21e-15

DUF21541Cell wall-active antibiotics response 4TMS YvqF374-47332.65.6e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_095853041.1 PspC domain-containing protein [Streptomyces sp. Ag82_O1-15]... 14320.0e+00
WP_097225036.1 PspC domain-containing protein [Streptomyces sp. OV198] >emb... 14250.0e+00
WP_181650297.1 PspC domain-containing protein [Streptomyces sp. WAC00263] >... 14240.0e+00
WP_217573268.1 PspC domain-containing protein [Streptomyces sp. GbtcB7] 14240.0e+00
WP_143602656.1 MULTISPECIES: PspC domain-containing protein [unclassified S... 14230.0e+00
WP_169081072.1 PspC domain-containing protein [Streptomyces sp. RLA2-12] >g... 14230.0e+00
WP_097285905.1 PspC domain-containing protein [Streptomyces sp. OK228] >emb... 14220.0e+00
WP_075028454.1 PspC domain-containing protein [Streptomyces mirabilis] >emb... 14200.0e+00
WP_212727076.1 PspC domain-containing protein [Streptomyces mirabilis] >gb 14160.0e+00
WP_067366888.1 PspC domain-containing protein [Streptomyces olivochromogene... 14130.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4121 Seems to have no N-terminal signal seq.