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IDSAVERM_3497 TypeCDS
From4332475 nt length1458
To4333932 aa length485
GenelysA3 pI6.52
Definitionputative diaminopimelate decarboxylase M.W (Da)49464
NotePF02784: Pyridoxal-dependent decarboxylase, pyridoxal binding domain AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0315 putative decarboxylase4898.0e-172
sgrSGR_773 putative decarboxylase4933.0e-173
samSAM23877_3125 putative Diaminopimelate decarboxylase6560.0e+00
scabSCAB54691 putative diaminopimelate decarboxylase7140.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain92-325115.32.7e-33

Orn_DAP_Arg_deC1Pyridoxal-dependent decarboxylase, C-terminal sheet domain327-42132.28.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_079168498.1 diaminopimelate decarboxylase [Streptomyces colonosanans] 17520.0e+00
OIJ87382.1 diaminopimelate decarboxylase [Streptomyces colonosanans] 17410.0e+00
WP_081217680.1 diaminopimelate decarboxylase [Streptomyces sp. M41(2017)] >... 17250.0e+00
17230.0e+00
OPG05327.1 diaminopimelate decarboxylase [Streptomyces sp. GKU 895] 17230.0e+00
NUS22785.1 diaminopimelate decarboxylase [Streptomyces sp.] 17220.0e+00
NUS77430.1 diaminopimelate decarboxylase [Streptomyces sp.] 17220.0e+00
NUR40849.1 diaminopimelate decarboxylase [Streptomyces sp.] >gb 17210.0e+00
NUO40644.1 diaminopimelate decarboxylase [Streptomyces sp.] 17210.0e+00
WP_223189087.1 diaminopimelate decarboxylase [Streptomyces sp. TRM68416] 17200.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1744 Seems to have no N-terminal signal seq.