-- | --

IDSAVERM_3503 TypeCDS
From4338343 nt length861
To4337483 aa length286
Gene pI5.63
Definitionputative transcriptional regulator M.W (Da)30562
NotePF01418: Helix-turn-helix domain, rpiR family AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3075 putative transcriptional regulator4811.0e-174
sgrSGR_4456 putative RpiR-family transcriptional regulator4533.0e-163
samSAM23877_3127 putative transcriptional regulator4788.0e-173
scabSCAB54621 putative transcriptional regulator5200.0e+00
saceSACE_4847 transcriptional regulator, RpiR family1991.0e-63
paerPA3184 [gene=PA3184] [prot=probable transcriptional regulator] [comment=PA3184]631.6e-11

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_61Helix-turn-helix domain, rpiR family23-8442.54.3e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_051742223.1 MurR/RpiR family transcriptional regulator [Streptomyces xyl... 12469.7e-172
WP_190071585.1 MurR/RpiR family transcriptional regulator [Streptomyces lan... 12431.7e-171
WP_030952500.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [St... 12405.3e-171
WP_019066707.1 MurR/RpiR family transcriptional regulator [Streptomyces hok... 12355.0e-170
WP_200713685.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [un... 12355.0e-170
NUP23391.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.] >gb... 12335.6e-170
WP_043258990.1 MurR/RpiR family transcriptional regulator [Streptomyces pru... 12283.0e-169
WP_123965565.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 12275.4e-169
WP_235029409.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 12286.9e-169
WP_093904804.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 12267.8e-169

PSORT result

LocalizationCertaintyPSORT said
membrane0.1022 Seems to have no N-terminal signal seq.