| ID | SAVERM_3526
| Type | CDS
|
| From | 4363118
| nt length | 771
|
| To | 4363888
| aa length | 256
|
| Gene |
| pI | 8.49
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 27496
|
| Note | PF00005: ABC transporter
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3089 putative ABC transporter ATP-binding protein | 488 | 2.0e-178
|
| sgr | SGR_4446 putative ABC transporter ATP-binding protein | 434 | 4.0e-157
|
| sam | SAM23877_3138 putative ABC transporter ATP-binding protein | 478 | 3.0e-174
|
| scab | SCAB54511 putative ABC transporter ATP-binding protein | 485 | 4.0e-177
|
| sace | SACE_3194 ABC-type antimicrobial peptide transport ATPase component | 298 | 3.0e-103
|
| nfar | nfa46550 ABC transporter ATP-binding protein | 363 | 8.0e-102
|
| mtub | gi|15608126 PROBABLE ADHESION COMPONENT TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 189 | 1.2e-49
|
| cglu | gi|19553751 COG1136:ABC-type transport systems, involved in lipoprotein release, ATPase components [Corynebacterium glutamicum] | 314 | 2.3e-87
|
| paer | PA2857 [gene=PA2857] [prot=probable ATP-binding component of ABC transporter] [comment=PA2857] | 194 | 6.6e-51
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 34-180 | 103.9 | 9.1e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498099.1 | ABC transporter ATP-binding protein [Streptomyces sp. SID546...
| 1166 | 6.2e-161 |
| WP_184823291.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1159 | 1.5e-159 |
| WP_165999483.1 | ABC transporter ATP-binding protein [Streptomyces sp. JB150]...
| 1157 | 2.4e-159 |
| WP_189713088.1 | ABC transporter ATP-binding protein [Streptomyces phaeofacie...
| 1156 | 3.2e-159 |
| WP_221500093.1 | ABC transporter ATP-binding protein [Streptomyces griseostra...
| 1154 | 7.8e-159 |
| WP_073729216.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1146 | 1.2e-157 |
| WP_054237271.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1145 | 1.9e-157 |
| WP_217144237.1 | ABC transporter ATP-binding protein [Streptomyces sp. AC627_...
| 1144 | 2.5e-157 |
| WP_043501484.1 | ABC transporter ATP-binding protein [Streptomyces glaucescen...
| 1144 | 2.8e-157 |
| WP_077798472.1 | ABC transporter ATP-binding protein [Streptomyces sp. JHA26]
| 1143 | 2.9e-157 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2292 | Seems to have no N-terminal signal seq.
|