| ID | SAVERM_3562
| Type | CDS
|
| From | 4412314
| nt length | 975
|
| To | 4413288
| aa length | 324
|
| Gene | prsA1
| pI | 6.18
|
| Definition | putative ribose-phosphate pyrophosphokinase
| M.W (Da) | 35337
|
| Note | PF00156: Phosphoribosyl transferase domain
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3123 ribose-phosphate pyrophosphokinase | 640 | 0.0e+00
|
| sgr | SGR_4383 putative ribose-phosphate pyrophosphokinase | 639 | 0.0e+00
|
| sam | SAM23877_3172 phosphoribosylpyrophosphate synthase | 647 | 0.0e+00
|
| scab | SCAB54161 putative ribose-phosphate pyrophosphokinase | 640 | 0.0e+00
|
| sace | SACE_0816 ribose-phosphate pyrophosphokinase | 430 | 4.0e-153
|
| nfar | nfa48790 prsA phosphoribosyl pyrophosphate synthetase | 393 | 1.3e-110
|
| mtub | gi|15608157 ribose-phosphate pyrophosphokinase [Mycobacterium tuberculosis H37Rv] | 389 | 1.4e-109
|
| cglu | gi|19552168 COG0462:Phosphoribosylpyrophosphate synthetase [Corynebacterium glutamicum] | 403 | 5.1e-114
|
| bsub | BG10114 prs; phosphoribosyl pyrophosphate synthetase [EC:2.7.6.1] | 299 | 1.3e-82
|
| ecoli | gi|16129170 ribose-phosphate pyrophosphokinase [Escherichia coli K12] | 260 | 7.6e-71
|
| paer | PA4670 [gene=prs] [prot=ribose-phosphate pyrophosphokinase] [comment=PA4670] | 256 | 2.6e-69
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pribosyltran_N | 1 | N-terminal domain of ribose phosphate pyrophosphokinase | 12-128 | 153.6 | 1.7e-45
|
| Pribosyl_synth | 1 | Phosphoribosyl synthetase-associated domain | 215-321 | 87.6 | 9.8e-25
|
| Pribosyltran | 1 | Phosphoribosyl transferase domain | 168-260 | 61.4 | 6.7e-17
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_081217726.1 | ribose-phosphate diphosphokinase [Streptomyces sp. M41(2017)...
| 1694 | 0.0e+00 |
| WP_148008788.1 | ribose-phosphate diphosphokinase [Streptomyces sp. me109] >l...
| 1692 | 0.0e+00 |
| WP_028804911.1 | ribose-phosphate diphosphokinase [Streptomyces sp. 142MFCol3...
| 1690 | 0.0e+00 |
| WP_095934867.1 | ribose-phosphate diphosphokinase [Streptomyces sp. Tue6028] ...
| 1690 | 0.0e+00 |
| QIY96403.1 | ribose-phosphate diphosphokinase [Streptomyces sp. S1D4-11]
| 1690 | 0.0e+00 |
| WP_168528515.1 | ribose-phosphate diphosphokinase [Streptomyces sp. RPA4-2] >...
| 1690 | 0.0e+00 |
| NEB32998.1 | ribose-phosphate diphosphokinase [Streptomyces sp. SID14446]
| 1689 | 0.0e+00 |
| WP_095854208.1 | MULTISPECIES: ribose-phosphate diphosphokinase [unclassified...
| 1689 | 0.0e+00 |
| WP_054233019.1 | MULTISPECIES: ribose-phosphate diphosphokinase [Streptomyces...
| 1687 | 0.0e+00 |
| WP_168492433.1 | MULTISPECIES: ribose-phosphate diphosphokinase [Streptomyces...
| 1687 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1950 | Seems to have no N-terminal signal seq.
|