| ID | SAVERM_3588
| Type | CDS
|
| From | 4443094
| nt length | 1536
|
| To | 4441559
| aa length | 511
|
| Gene |
| pI | 7.36
|
| Definition | hypothetical protein
| M.W (Da) | 55139
|
| Note | PF03990: Domain of unknown function (DUF348)
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3150 hypothetical protein | 520 | 0.0e+00
|
| sgr | SGR_4355 conserved hypothetical protein | 530 | 0.0e+00
|
| sam | SAM23877_3197 Transglycosylase domain-containing protein | 528 | 0.0e+00
|
| scab | SCAB53851 hypothetical protein | 601 | 0.0e+00
|
| sace | SACE_0801 transglycosylase-like protein | 194 | 2.0e-56
|
| nfar | nfa49040 hypothetical protein | 177 | 2.5e-45
|
| mtub | gi|15608149 Probable resuscitation-promoting factor rpfB [Mycobacterium tuberculosis H37Rv] | 166 | 4.4e-42
|
| cglu | gi|19552135 COG3583:Uncharacterized BCR [Corynebacterium glutamicum] | 147 | 1.1e-36
|
| bsub | BG10103 yabE; similar to unknown proteins | 106 | 2.8e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF348 | 3 | Domain of unknown function (DUF348) | 179-218, 236-274, 293-332 | 117.2 | 1.7e-34
|
| G5 | 1 | G5 domain | 350-423 | 77.1 | 9.9e-22
|
| Transglycosylas | 1 | Transglycosylase-like domain | 432-505 | 77.1 | 1.1e-21
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1977 | Seems to have no N-terminal signal seq.
|