| ID | SAVERM_3603
| Type | CDS
|
| From | 4460304
| nt length | 1632
|
| To | 4461935
| aa length | 543
|
| Gene | pbp3
| pI | 5.92
|
| Definition | putative penicillin-binding protein, secreted
| M.W (Da) | 55326
|
| Note | PF05223: NTF2-like N-terminal transpeptidase domain
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | cell wall
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3156 putative penicillin-binding protein | 783 | 0.0e+00
|
| sgr | SGR_4340 putative penicillin-binding protein | 554 | 0.0e+00
|
| sam | SAM23877_3202 Penicillin-binding protein | 779 | 0.0e+00
|
| scab | SCAB53621 putative penicillin-binding protein, secreted | 709 | 0.0e+00
|
| sace | SACE_5990 penicillin-binding protein, transpeptidase | 136 | 6.0e-35
|
| nfar | nfa41160 penicillin-binding protein | 137 | 1.8e-33
|
| mtub | gi|15610001 POSSIBLE PENICILLIN-BINDING LIPOPROTEIN [Mycobacterium tuberculosis H37Rv] | 133 | 3.4e-32
|
| cglu | gi|19553212 COG0768:Cell division protein FtsI/penicillin-binding protein 2 [Corynebacterium glutamicum] | 129 | 3.5e-31
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Transpeptidase | 1 | Penicillin binding protein transpeptidase domain | 266-539 | 128.1 | 3.6e-37
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2147 | Seems to have an uncleavable N-term signal seq
|